[ 原始碼： stacks ]
套件：stacks-web（2.2 dfsg-1）
web interface for displaying loci from short-read sequences
Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.
This package provides the web-based viewer which you can use to examine Stacks output that has been loaded into a MySQL database.
其他與 stacks-web 有關的套件
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- dep: apache2
- Apache HTTP Server
- 或者 httpd
- 本虛擬套件由這些套件填實： apache2, ebhttpd, lighttpd, micro-httpd, mini-httpd, nginx-extras, nginx-full, nginx-light, tntnet, webfs, yaws
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- dep: default-mysql-server
- MySQL database server binaries and system database setup (metapackage)
- 或者 virtual-mysql-server
- 本虛擬套件由這些套件填實： mariadb-server-10.3
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- dep: libapache2-mod-php
- server-side, HTML-embedded scripting language (Apache 2 module) (default)
同時作為一個虛擬套件由這些套件填實： libapache2-mod-php7.3 - 或者 php-cgi
- server-side, HTML-embedded scripting language (CGI binary) (default)
同時作為一個虛擬套件由這些套件填實： php7.3-cgi
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- dep: libdbd-mysql-perl
- Perl5 database interface to the MariaDB/MySQL database
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- dep: php-mdb2-driver-mysql
- mysql MDB2 driver
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- rec: stacks
- pipeline for building loci from short-read DNA sequences