Paket: r-bioc-deseq2 (1.44.0 dfsg-1)

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Liknande paket:

R package for RNA-Seq Differential Expression Analysis

Differential gene expression analysis based on the negative binomial distribution. Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution.

Andra paket besläktade med r-bioc-deseq2

beror

rekommenderar

föreslår

enhances

dep: libblas3

Basic Linear Algebra Reference implementations, shared library

eller libblas.so.3

virtuellt paket som tillhandahålls av libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
dep: libc6 (>= 2.27) [riscv64]

GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb

dep: libc6 (>= 2.29) [ej riscv64]
dep: libgcc-s1 (>= 3.0)

GCC stödbibliotek
dep: liblapack3

Library of linear algebra routines 3 - shared version

eller liblapack.so.3

virtuellt paket som tillhandahålls av liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
dep: libstdc 6 (>= 14)

GNU standardbibliotek v3 för C
dep: r-api-4.0

virtuellt paket som tillhandahålls av r-base-core
dep: r-api-bioc-3.19

virtuellt paket som tillhandahålls av r-bioc-biocgenerics
dep: r-bioc-biobase (>= 2.64.0)

base functions for Bioconductor
dep: r-bioc-biocgenerics (>= 0.50.0)

generic functions for Bioconductor
dep: r-bioc-biocparallel (>= 1.38.0)

BioConductor facilities for parallel evaluation
dep: r-bioc-genomicranges (>= 1.56.1)

BioConductor representation and manipulation of genomic intervals
dep: r-bioc-iranges (>= 2.38.1)

GNU R low-level containers for storing sets of integer ranges
dep: r-bioc-matrixgenerics (>= 1.16.0)

S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects
dep: r-bioc-s4vectors (>= 0.42.1)

BioConductor S4 implementation of vectors and lists
dep: r-bioc-summarizedexperiment (>= 1.34.0)

BioConductor assay container
dep: r-cran-ggplot2 (>= 3.4.0)

implementation of the Grammar of Graphics
dep: r-cran-locfit

GNU R local regression, likelihood and density estimation
dep: r-cran-matrixstats

GNU R methods that apply to rows and columns of a matrix
dep: r-cran-rcpp (>= 0.11.0)

GNU R package for Seamless R and C Integration
dep: r-cran-rcpparmadillo

GNU R package for Armadillo C linear algebra library

sug: r-bioc-glmgampoi (>= 1.16.0)

GNU R fit a Gamma-Poisson generalized linear model
sug: r-bioc-tximeta (>= 1.22.1)

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sug: r-bioc-tximportdata (>= 1.32.0)

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access the Bioconductor project package repository
sug: r-cran-knitr

GNU R package for dynamic report generation using Literate Programming
sug: r-cran-pbapply

GNU R package providing progress bars for vectorized R functions
sug: r-cran-pheatmap

GNU R package to create pretty heatmaps
sug: r-cran-rcolorbrewer

GNU R package providing suitable color palettes
sug: r-cran-readr

GNU R package to read rectangular text data
sug: r-cran-rmarkdown

convert R markdown documents into a variety of formats
sug: r-cran-testthat

GNU R testsuite

Hämta r-bioc-deseq2

Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	1.253,3 kbyte	1.740,0 kbyte	[filförteckning]
arm64	1.240,1 kbyte	1.752,0 kbyte	[filförteckning]
mips64el	1.243,4 kbyte	1.760,0 kbyte	[filförteckning]
ppc64el	1.253,4 kbyte	1.816,0 kbyte	[filförteckning]
riscv64	1.251,0 kbyte	1.687,0 kbyte	[filförteckning]
s390x	1.254,1 kbyte	1.748,0 kbyte	[filförteckning]