Paket: python-biopython (1.73 dfsg-1)

Länkar för python-biopython

Debianresurser:

Hämta källkodspaketet python-biopython:

Ansvariga:

Debian Med Packaging Team (QA-sida, E-postarkiv)
Charles Plessy (QA-sida)
Andreas Tille (QA-sida)

Externa resurser:

Hemsida [biopython.org]

Liknande paket:

Python library for bioinformatics (implemented in Python 2)

The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology.

It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License, which is extremely liberal and compatible with almost every license in the world. The project works along with the Open Bioinformatics Foundation, who generously provide web and CVS space for the project.

This package is targeting Python version 2.

Märken: Software Development: Python Development, Bibliotek, Field: field::biology, field::biology:bioinformatics, Implemented in: Python, Role: role::devel-lib, role::shared-lib

Andra paket besläktade med python-biopython

beror

rekommenderar

föreslår

enhances

dep: libc6 (>= 2.14) [amd64]

GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb

dep: libc6 (>= 2.17) [arm64]

dep: libc6 (>= 2.4) [armhf, i386]
dep: python

interactive high-level object-oriented language (Python2 version)

dep: python (<< 2.8)

dep: python (>= 2.7~)
dep: python-numpy (>= 1:1.16.0~rc1)

Numerical Python adds a fast array facility to the Python language
dep: python-numpy-abi9

virtuellt paket som tillhandahålls av python-numpy
dep: python-reportlab

ReportLab library to create PDF documents using Python

rec: ncbi-blast

next generation suite of BLAST sequence search tools
rec: python-biopython-doc (= 1.73 dfsg-1)

Documentation for the Biopython library

sug: bwa [amd64]

Burrows-Wheeler Aligner
sug: clustalo

General purpose multiple sequence alignment program for proteins
sug: clustalw

global multiple nucleotide or peptide sequence alignment
sug: dialign

Segment-based multiple sequence alignment
sug: dssp

protein secondary structure assignment based on 3D structure
sug: emboss

European molecular biology open software suite
sug: fasttree

phylogenetic trees from alignments of nucleotide or protein sequences
sug: mafft

Multiple alignment program for amino acid or nucleotide sequences
sug: muscle

Multiple alignment program of protein sequences
sug: phylip

package of programs for inferring phylogenies
sug: phyml

Phylogenetic estimation using Maximum Likelihood
sug: prank

Probabilistic Alignment Kit for DNA, codon and amino-acid sequences
sug: probcons

PROBabilistic CONSistency-based multiple sequence alignment
sug: python-matplotlib

Python based plotting system in a style similar to Matlab
sug: python-mysqldb

Python interface to MySQL
sug: python-pil

Python Imaging Library (Pillow fork)
sug: python-psycopg2

Python module for PostgreSQL
sug: python-rdflib (>= 4)

Python library containing an RDF triple store and RDF parsers/serializers
sug: python-renderpm

python low level render interface
sug: python-scipy

scientific tools for Python
sug: python-tk

Tkinter - Writing Tk applications with Python2
sug: raxml

Randomized Axelerated Maximum Likelihood of phylogenetic trees
sug: samtools

processing sequence alignments in SAM, BAM and CRAM formats
sug: t-coffee

Multiple Sequence Alignment
sug: w3-dtd-mathml

Mathematical Markup Language V2.0 DTD
sug: wise (>= 2.4.1-16)

comparison of biopolymers, like DNA and protein sequences

Hämta python-biopython

Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	1.302,5 kbyte	8.974,0 kbyte	[filförteckning]
arm64	1.291,9 kbyte	8.907,0 kbyte	[filförteckning]
armhf	1.282,2 kbyte	8.822,0 kbyte	[filförteckning]
i386	1.302,6 kbyte	8.967,0 kbyte	[filförteckning]