[ Källkod: pbsuite ]
Paket: pbhoney (15.8.24 dfsg-7)
Länkar för pbhoney
Debianresurser:
Hämta källkodspaketet pbsuite:
- [pbsuite_15.8.24 dfsg-7.dsc]
- [pbsuite_15.8.24 dfsg.orig.tar.xz]
- [pbsuite_15.8.24 dfsg-7.debian.tar.xz]
Ansvariga:
Externa resurser:
- Hemsida [sourceforge.net]
Liknande paket:
genomic structural variation discovery
PBHoney is an implementation of two variant-identification approaches designed to exploit the high mappability of long reads (i.e., greater than 10,000 bp). PBHoney considers both intra-read discordance and soft-clipped tails of long reads to identify structural variants.
PBHoney is part of the PBSuite.
Andra paket besläktade med pbhoney
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- dep: blasr
- mapping single-molecule sequencing reads
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- dep: python3-h5py
- general-purpose Python interface to hdf5
-
- dep: python3-intervaltree-bio
- Interval tree convenience classes for genomic data -- Python 3 library
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- dep: python3-networkx
- tool to create, manipulate and study complex networks (Python3)
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- dep: python3-numpy
- Fast array facility to the Python 3 language
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- dep: python3-pbbanana (= 15.8.24 dfsg-7)
- additional utilities for the pbsuite
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- dep: python3-pbsuite-utils (= 15.8.24 dfsg-7)
- software for Pacific Biosciences sequencing data -- Python utilities
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- rec: pbdagcon
- sequence consensus using directed acyclic graphs
Hämta pbhoney
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| all | 1.031,7 kbyte | 3.809,0 kbyte | [filförteckning] |