Paket: igv (2.16.0 dfsg-1)

Länkar för igv

Debianresurser:

Hämta källkodspaketet igv:

Ansvariga:

Debian Med Packaging Team (QA-sida, E-postarkiv)
Andreas Tille (QA-sida)
Olivier Sallou (QA-sida)
Pierre Gruet (QA-sida)

Externa resurser:

Hemsida [www.broadinstitute.org]

Liknande paket:

Integrative Genomics Viewer

The Integrative Genomics Viewer (IGV) is a high-performance viewer that efficiently handles large heterogeneous data sets, while providing a smooth and intuitive user experience at all levels of genome resolution. A key characteristic of IGV is its focus on the integrative nature of genomic studies, with support for both array-based and next-generation sequencing data, and the integration of clinical and phenotypic data. Although IGV is often used to view genomic data from public sources, its primary emphasis is to support researchers who wish to visualize and explore their own data sets or those from colleagues. To that end, IGV supports flexible loading of local and remote data sets, and is optimized to provide high-performance data visualization and exploration on standard desktop systems.

Märken: Field: Biologi, Bioinformatics, Implemented in: implemented-in::java, interface::commandline, User Interface: Graphical User Interface, interface::x11, network::client, Network Protocol: HTTP, Role: Program, Scope: scope::utility, use::viewing, Works with: Biological Sequence, X Window System: Application

Andra paket besläktade med igv

beror

rekommenderar

föreslår

enhances

dep: default-jre

Standard Java or Java compatible Runtime
dep: libbatik-java

xml.apache.org SVG Library
dep: libcommons-io-java

Common useful IO related classes
dep: libcommons-lang3-java

Apache Commons Lang utility classes
dep: libcommons-math3-java

Java lightweight mathematics and statistics components
dep: libdsiutils-java

Java library of statistical and text data handling tools
dep: libfastutil-java

Java API providing type-specific maps, sets, lists and queues
dep: libgoogle-gson-java

Converts Java objects into their JSON representation
dep: libguava-java

Suite of Google common libraries for Java
dep: libhtsjdk-java

Java API for high-throughput sequencing data (HTS) formats
dep: libicb-utils-java

Java library of utilities to manage files and compute statistics
dep: libjide-oss-java

extensible Swing component library for Java
dep: libjsap-java

Java Simple Argument Parser
dep: liblog4j1.2-java

Logging library for java
dep: liblog4j2-java

Apache Log4j - Logging Framework for Java
dep: libnb-absolutelayout-java

Java LayoutManager to allow placement in absolute positions
dep: libprotobuf-java

Java bindings for protocol buffers
dep: libswing-layout-java

Extensions to Swing layout
dep: libxml-commons-external-java

XML Commons external code - DOM, SAX, and JAXP, etc

rec: libmariadb-java

Java database driver for MariaDB and MySQL

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