Balík: r-bioc-genomicranges (1.56.1 dfsg-1)

Odkazy pre r-bioc-genomicranges

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Stiahnuť zdrojový balík r-bioc-genomicranges:

Správcovia:

Externé zdroje:

Domovská stránka [bioconductor.org]

Podobné balíky:

BioConductor representation and manipulation of genomic intervals

The ability to efficiently store genomic annotations and alignments is playing a central role when it comes to analyze high-throughput sequencing data (a.k.a. NGS data). The package defines general purpose containers for storing genomic intervals as well as more specialized containers for storing alignments against a reference genome.

Ostatné balíky súvisiace s balíkom r-bioc-genomicranges

závisí

odporúča

navrhuje

vylepšuje

dep: libc6 (>= 2.17) [arm64, ppc64el]

knižnica GNU C - zdieľané knižnice
tiež virtuálny balík poskytovaný balíkom libc6-udeb

dep: libc6 (>= 2.27) [riscv64]

dep: libc6 (>= 2.4) [amd64, mips64el, s390x]
dep: r-api-4.0

virtuálny balík poskytovaný balíkom r-base-core
dep: r-api-bioc-3.19

virtuálny balík poskytovaný balíkom r-bioc-biocgenerics
dep: r-bioc-biocgenerics (>= 0.50.0)

generic functions for Bioconductor
dep: r-bioc-genomeinfodb (>= 1.40.1)

BioConductor utilities for manipulating chromosome identifiers
dep: r-bioc-iranges (>= 2.38.1)

GNU R low-level containers for storing sets of integer ranges
dep: r-bioc-s4vectors (>= 0.42.1)

BioConductor S4 implementation of vectors and lists
dep: r-bioc-xvector (>= 0.44.0)

BioConductor representation and manpulation of external sequences

sug: r-bioc-annotate (>= 1.82.0)

BioConductor annotation for microarrays
sug: r-bioc-annotationdbi (>= 1.66.0)

GNU R Annotation Database Interface for BioConductor
sug: r-bioc-annotationhub (>= 3.12.0)

GNU R client to access AnnotationHub resources
sug: r-bioc-biobase (>= 2.64.0)

base functions for Bioconductor
sug: r-bioc-biocstyle (>= 2.32.1)

standard styles for vignettes and other Bioconductor documents
sug: r-bioc-biostrings (>= 2.72.1)

GNU R string objects representing biological sequences
sug: r-bioc-bsgenome (>= 1.72.0)

BioConductor infrastructure for Biostrings-based genome data packages
sug: r-bioc-deseq2 (>= 1.44.0)

R package for RNA-Seq Differential Expression Analysis
sug: r-bioc-dexseq (>= 1.50.0)

GNU R inference of differential exon usage in RNA-Seq
sug: r-bioc-edger (>= 4.2.0)

Empirical analysis of digital gene expression data in R
sug: r-bioc-genomicalignments (>= 1.40.0)

BioConductor representation and manipulation of short genomic alignments
sug: r-bioc-genomicfeatures (>= 1.56.0)

GNU R tools for making and manipulating transcript centric annotations
sug: r-bioc-gviz (>= 1.48.0)

Plotting data and annotation information along genomic coordinates
sug: r-bioc-keggrest (>= 1.44.1)

GNU R client-side REST access to KEGG
sug: r-bioc-rsamtools (>= 2.20.0)

GNU R binary alignment (BAM), variant call (BCF), or tabix file import
sug: r-bioc-rtracklayer (>= 1.64.0)

GNU R interface to genome browsers and their annotation tracks
sug: r-bioc-summarizedexperiment (>= 1.34.0)

BioConductor assay container
sug: r-bioc-variantannotation (>= 1.50.0)

BioConductor annotation of genetic variants
sug: r-cran-digest

GNU R package for 'hash digest' of R data structures
sug: r-cran-knitr

balík GNU R na dynamickú tvorbu zostáv pomocou Literate Programming
sug: r-cran-matrix

balík tried GNU R pre husté a riedke matice
sug: r-cran-rmarkdown

convert R markdown documents into a variety of formats
sug: r-cran-runit

GNU R package providing unit testing framework

Stiahnuť r-bioc-genomicranges

Stiahnuť pre všetky dostupné architektúry
Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
amd64	1,799.1 kB	2,804.0 kB	[zoznam súborov]
arm64	1,798.7 kB	2,820.0 kB	[zoznam súborov]
mips64el	1,797.4 kB	2,825.0 kB	[zoznam súborov]
ppc64el	1,799.0 kB	2,820.0 kB	[zoznam súborov]
riscv64	1,798.9 kB	2,796.0 kB	[zoznam súborov]
s390x	1,798.2 kB	2,804.0 kB	[zoznam súborov]