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Pakiet źródłowy: picard-tools (3.3.0 dfsg-1)

Odnośniki dla picard-tools

Zasoby systemu Debian:

Opiekunowie:

Debian Med Packaging Team (Strona QA, Archiwum e-mail)
Charles Plessy (Strona QA)
Olivier Sallou (Strona QA)
Vincent Danjean (Strona QA)
Andreas Tille (Strona QA)
Steffen Moeller (Strona QA)
Pierre Gruet (Strona QA)

Zasoby zewnętrzne:

Strona internetowa [broadinstitute.github.io]

Z tego pakietu źródłowego zbudowano następujące pakiety binarne:

libpicard-java: Java library to manipulate SAM and BAM files
libpicard-java-doc: Documentation for the java picard library
picard-tools: Command line tools to manipulate SAM and BAM files

Inne pakiety związane z picard-tools

build-depends

build-depends-indep

adep: default-jdk

Standard Java or Java compatible Development Kit
adep: debhelper-compat (= 13)

Pakiet niedostępny
adep: javahelper

Helper scripts for packaging Java programs
adep: gradle-debian-helper

Helper tools for building Debian packages with Gradle
adep: maven-repo-helper

Helper tools for including Maven metadata in Debian packages
adep: libguava-java

Suite of Google common libraries for Java
adep: libcommons-collections4-java

Apache Commons Collections - Extended Collections API for Java
adep: libcommons-io-java

Common useful IO related classes
adep: libcommons-lang-java

Commons Lang - an extension of the java.lang package
adep: libcommons-lang3-java

Apache Commons Lang utility classes
adep: libcommons-math3-java

Java lightweight mathematics and statistics components
adep: libbarclay-java

Java library to parse command line
adep: libgkl-java

Java library to manipulate SAM and BAM files
adep: libgkl-jni [amd64]

native libraries of Java library to manipulate SAM and BAM files
adep: libgatk-native-bindings-java

library of native bindings for gatk and picard-tools
adep: libhtsjdk-java (>= 3.0.2 dfsg)

Java API for high-throughput sequencing data (HTS) formats
adep: libhttp-nio-java

http/s file system provider for Java NIO.2
adep: libjoptsimple-java

Command line parsing java library
adep: libmjson-java

lean JSON Library for Java with a compact API
adep: testng

testing framework for Java
adep: r-base-core

GNU R core of statistical computation and graphics system
adep: default-jdk-doc

Standard Java or Java compatible Development Kit (documentation)
adep: libhtsjdk-java-doc

Documentation for the java HTSJDK library
adep: libjs-jquery

JavaScript library for dynamic web applications

Download picard-tools

Plik	Rozmiar (w KiB)	Suma kontrolna MD5
picard-tools_3.3.0 dfsg-1.dsc	2,7 KiB	f51a104672a8bc774b446429ada95d45
picard-tools_3.3.0 dfsg.orig.tar.xz	57 820,7 KiB	f77fd53a83e1e2e3950ea9a94fcfd82f
picard-tools_3.3.0 dfsg-1.debian.tar.xz	26,9 KiB	d8352393ef34cb58cfee19b04f5bf43d

Repozytorium kodu źródłowego Debiana (VCS: Git): https://salsa.debian.org/med-team/picard-tools.git
Repozytorium kodu źródłowego Debiana (do przeglądania): https://salsa.debian.org/med-team/picard-tools