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[ Bron: htslib  ]

Pakket: tabix (1.11-4)

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generic indexer for TAB-delimited genome position files

Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosome), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name.

This package is built from the HTSlib source, and provides the bgzip, htsfile, and tabix tools.

Tags: Implemented in: C, Role: Program, Wetenschap: science::calculation, use::calculating, Supports Format: HTML, Hypertext Markup Language, Works with: Text

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tabix downloaden

Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
amd64 330,7 kB1.087,0 kB [overzicht]
arm64 308,5 kB1.011,0 kB [overzicht]
armel 293,1 kB1.004,0 kB [overzicht]
armhf 298,7 kB728,0 kB [overzicht]
i386 360,7 kB1.200,0 kB [overzicht]
mips64el 312,8 kB1.240,0 kB [overzicht]
mipsel 327,7 kB1.215,0 kB [overzicht]
ppc64el 358,6 kB1.467,0 kB [overzicht]
s390x 301,7 kB1.151,0 kB [overzicht]