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[ Source: brig  ]

Package: brig (0.95 dfsg-3)

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BLAST Ring Image Generator

BRIG can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data. 

 * Images show similarity between a central reference sequence and other
   sequences as concentric rings.
 * BRIG will perform all BLAST comparisons and file parsing automatically
   via a simple GUI.
 * Contig boundaries and read coverage can be displayed for draft genomes;
   customized graphs and annotations can be displayed.
 * Using a user-defined set of genes as input, BRIG can display gene
   presence, absence, truncation or sequence variation in a set of
   complete genomes, draft genomes or even raw, unassembled sequence data.
 * BRIG also accepts SAM-formatted read-mapping files enabling genomic
   regions present in unassembled sequence data from multiple samples to
   be compared simultaneously

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Download for all available architectures
Architecture Package Size Installed Size Files
armel 112.0 kB412.0 kB [list of files]