Paketti: metastudent (2.0.1-6)

Links for metastudent

Debian-palvelut:

Imuroi lähdekoodipaketti metastudent:

Ylläpitäjät:

External Resources:

Kotisivu [rostlab.org]

Samankaltaisia paketteja:

predictor of Gene Ontology terms from protein sequence

Often, only the sequence of a protein is known, but not its functions. Metastudent will try to predict missing functional annotations through homology searches (BLAST).

All predicted functions correspond to Gene Ontology (GO) terms from the Molecular Function (MFO), the Biological Process (BPO) and the Cellular Component Ontology (CCO) and are associated with a reliability score.

Muut pakettiin metastudent liittyvät paketit

depends

recommends

suggests

enhances

dep: blast2

transitional dummy package to ncbi-blast -legacy
dep: default-jre

Standard Java or Java compatible Runtime
dep: libfile-chdir-perl

more sensible way to change directories
dep: libgo-perl (>= 0.15-3)

perl modules for GO and other OBO ontologies
dep: libgraphviz-perl

Perl interface to the GraphViz graphing tool
dep: libipc-run-perl

Perl module for running processes
dep: metastudent-data (>= 2.0.0)

predictor of Gene Ontology terms from protein sequence - data files
dep: perl

Larry Wallin kieli tekstitiedostojen analysointia ja raportointia varten
dep: python

interactive high-level object-oriented language (Python2 version)

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