Paketti: yaha (0.1.83-3)

Links for yaha

Debian-palvelut:

Imuroi lähdekoodipaketti yaha:

Ylläpitäjät:

External Resources:

Kotisivu [github.com]

Samankaltaisia paketteja:

find split-read mappings on single-end queries

yaha is an open source, flexible, sensitive and accurate DNA aligner designed for single-end reads. It supports three major modes of operation:

 * The default “Optimal Query Coverage” (-OQC) mode reports the
   best set of alignments that cover the length of each query.
 * Using “Filter By Similarity” (-FBS), along with the best set of
   alignments, yaha will also output alignments that are highly similar
   to an alignment in the best set.
 * Finally, yaha can output all the alignments found for each query.

The -OQC and -FBS modes are specifically tuned to form split read mappings that can be used to accurately identify structural variation events (deletions, duplications, insertions or inversions) between the subject query and the reference genome.

Muut pakettiin yaha liittyvät paketit

depends

recommends

suggests

enhances

dep: libc6 (>= 2.17) [arm64, ppc64el]

GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb

dep: libc6 (>= 2.4) [ei arm64, ppc64el]
dep: libgcc-s1 (>= 3.5) [armel, armhf]

GCC:n apukirjasto

dep: libgcc-s1 (>= 4.2) [mipsel]

Imuroi yaha

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	43.0 kt	109.0 kt	[tiedostoluettelo]
arm64	39.8 kt	101.0 kt	[tiedostoluettelo]
armel	36.1 kt	92.0 kt	[tiedostoluettelo]
armhf	36.2 kt	72.0 kt	[tiedostoluettelo]
i386	46.2 kt	116.0 kt	[tiedostoluettelo]
mips64el	46.3 kt	129.0 kt	[tiedostoluettelo]
mipsel	45.3 kt	123.0 kt	[tiedostoluettelo]
ppc64el	48.7 kt	145.0 kt	[tiedostoluettelo]
s390x	41.5 kt	113.0 kt	[tiedostoluettelo]