Paketti: r-bioc-deseq2 (1.38.3 dfsg-1)

Links for r-bioc-deseq2

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Imuroi lähdekoodipaketti r-bioc-deseq2:

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External Resources:

Kotisivu [bioconductor.org]

Samankaltaisia paketteja:

R package for RNA-Seq Differential Expression Analysis

Differential gene expression analysis based on the negative binomial distribution. Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution.

Muut pakettiin r-bioc-deseq2 liittyvät paketit

depends

recommends

suggests

enhances

dep: libblas3

Basic Linear Algebra Reference implementations, shared library

tai libblas.so.3

näennäispaketti, jonka toteuttaa libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
dep: libc6 (>= 2.29)

GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb
dep: libgcc-s1 (>= 3.0) [ei armel, armhf]

GCC:n apukirjasto

dep: libgcc-s1 (>= 3.5) [armel, armhf]
dep: liblapack3

Library of linear algebra routines 3 - shared version

tai liblapack.so.3

näennäispaketti, jonka toteuttaa libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
dep: libstdc 6 (>= 5.2) [armel, armhf]

GNU standardi C -kirjasto, versio 3

dep: libstdc 6 (>= 9) [ei armel, armhf]
dep: r-api-4.0

näennäispaketti, jonka toteuttaa r-base-core
dep: r-api-bioc-3.16

näennäispaketti, jonka toteuttaa r-bioc-biocgenerics
dep: r-base-core (>= 4.2.2.20221110-2)

GNU R core of statistical computation and graphics system
dep: r-bioc-biobase

base functions for Bioconductor
dep: r-bioc-biocgenerics (>= 0.7.5)

generic functions for Bioconductor
dep: r-bioc-biocparallel

BioConductor facilities for parallel evaluation
dep: r-bioc-geneplotter

R package of functions for plotting genomic data
dep: r-bioc-genomicranges

BioConductor representation and manipulation of genomic intervals
dep: r-bioc-iranges

GNU R low-level containers for storing sets of integer ranges
dep: r-bioc-s4vectors (>= 0.23.18)

BioConductor S4 implementation of vectors and lists
dep: r-bioc-summarizedexperiment (>= 1.1.6)

BioConductor assay container
dep: r-cran-ggplot2

implementation of the Grammar of Graphics
dep: r-cran-locfit

GNU R local regression, likelihood and density estimation
dep: r-cran-matrixstats

GNU R methods that apply to rows and columns of a matrix
dep: r-cran-rcpp (>= 0.11.0)

GNU R package for Seamless R and C Integration
dep: r-cran-rcpparmadillo

GNU R package for Armadillo C linear algebra library

sug: r-bioc-glmgampoi

GNU R fit a Gamma-Poisson generalized linear model
sug: r-bioc-tximeta

Transcript Quantification Import with Automatic Metadata
sug: r-bioc-tximport

transcript-level estimates for biological sequencing
sug: r-bioc-tximportdata

GNU R various transcript abundance quantifiers
sug: r-cran-biocmanager

access the Bioconductor project package repository
sug: r-cran-knitr

GNU R package for dynamic report generation using Literate Programming
sug: r-cran-pbapply

GNU R package providing progress bars for vectorized R functions
sug: r-cran-pheatmap

GNU R package to create pretty heatmaps
sug: r-cran-rcolorbrewer

GNU R package providing suitable color palettes
sug: r-cran-readr

GNU R package to read rectangular text data
sug: r-cran-rmarkdown

convert R markdown documents into a variety of formats
sug: r-cran-testthat

GNU R testsuite

Imuroi r-bioc-deseq2

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	1,258.2 kt	1,757.0 kt	[tiedostoluettelo]
arm64	1,245.6 kt	1,781.0 kt	[tiedostoluettelo]
armel	1,248.4 kt	1,727.0 kt	[tiedostoluettelo]
armhf	1,246.4 kt	1,671.0 kt	[tiedostoluettelo]
i386	1,267.3 kt	1,775.0 kt	[tiedostoluettelo]
mips64el	1,249.0 kt	1,790.0 kt	[tiedostoluettelo]
mipsel	1,250.9 kt	1,786.0 kt	[tiedostoluettelo]
ppc64el	1,259.2 kt	1,781.0 kt	[tiedostoluettelo]
s390x	1,250.4 kt	1,753.0 kt	[tiedostoluettelo]