Paketti: r-bioc-demixt (1.14.0 dfsg-1)

Links for r-bioc-demixt

Debian-palvelut:

Imuroi lähdekoodipaketti r-bioc-demixt:

Ylläpitäjät:

External Resources:

Kotisivu [bioconductor.org]

Samankaltaisia paketteja:

Cell type-specific deconvolution of heterogeneous tumor samples

When studying cancer cells from tumors excised from patients, the samples will be a mixture of tumors and healthy cells, e.g. from invading immune cells. For comparing samples, the interest may be more on comparing the transcriptome of the tumors themselves.

This package prepares the statistical separation (deconvolution) of RNAseq or microarray generated expression data for two or three components.

Muut pakettiin r-bioc-demixt liittyvät paketit

depends

recommends

suggests

enhances

dep: libc6 (>= 2.29)

GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb
dep: libgcc-s1 (>= 3.5)

GCC:n apukirjasto
dep: libgomp1 (>= 4.9)

GCC OpenMP (GOMP) support library
dep: libstdc 6 (>= 5.2)

GNU standardi C -kirjasto, versio 3
dep: r-api-4.0

näennäispaketti, jonka toteuttaa r-base-core
dep: r-api-bioc-3.16

näennäispaketti, jonka toteuttaa r-bioc-biocgenerics
dep: r-base-core (>= 4.2.2.20221110-1)

GNU R core of statistical computation and graphics system
dep: r-bioc-dss

Bioconductor dispersion shrinkage for sequencing data
dep: r-bioc-summarizedexperiment

BioConductor assay container
dep: r-bioc-sva

GNU R Surrogate Variable Analysis
dep: r-cran-base64enc

GNU R package that provides tools for base64 encoding
dep: r-cran-dendextend

Extending 'dendrogram' Functionality in GNU R
dep: r-cran-ggplot2

implementation of the Grammar of Graphics
dep: r-cran-kernsmooth

GNU R package for kernel smoothing and density estimation
dep: r-cran-knitr

GNU R package for dynamic report generation using Literate Programming
dep: r-cran-matrixcalc

GNU R functions for matrix calculations -- matrixcalc
dep: r-cran-matrixstats

GNU R methods that apply to rows and columns of a matrix
dep: r-cran-psych

GNU R procedures for psychological, psychometric, and personality research
dep: r-cran-rcpp (>= 1.0.0)

GNU R package for Seamless R and C Integration
dep: r-cran-rmarkdown

convert R markdown documents into a variety of formats
dep: r-cran-truncdist

GNU R functions for truncated random variables

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