[ Quellcode: pycoqc ]
Paket: pycoqc (2.5.2 dfsg-3)
Links für pycoqc
Debian-Ressourcen:
Quellcode-Paket pycoqc herunterladen:
Betreuer:
- Debian Med Packaging Team (QS-Seite, E-Mail-Archiv)
- Andreas Tille (QS-Seite)
- Nilesh Patra (QS-Seite)
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
computes metrics and generates Interactive QC plots
PycoQC computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data
PycoQC relies on the sequencing_summary.txt file generated by Albacore and Guppy, but if needed it can also generates a summary file from basecalled fast5 files. The package supports 1D and 1D2 runs generated with Minion, Gridion and Promethion devices and basecalled with Albacore 1.2.1 or Guppy 2.1.3
Andere Pakete mit Bezug zu pycoqc
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-h5py
- general-purpose Python interface to hdf5
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- dep: python3-h5py-serial
- general-purpose Python interface to hdf5 (Python 3 serial)
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- dep: python3-jinja2
- Eigenständiges, kleines, aber schnelles und einfach bedienbares Vorlagenprogramm
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- dep: python3-numpy
- Fast array facility to the Python language (Python 3)
-
- dep: python3-pandas
- data structures for "relational" or "labeled" data
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- dep: python3-plotly (>= 4.1.0)
- Python 3 plotting library for publication-quality graphs
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: python3-scipy
- Wissenschaftliche Werkzeuge für Python 3
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- dep: python3-tqdm
- fast, extensible progress bar for Python 3 and CLI tool
pycoqc herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| all | 35,4 kB | 194,0 kB | [Liste der Dateien] |