Paket: igv (2.18.5 dfsg-1)

Links für igv

Debian-Ressourcen:

Quellcode-Paket igv herunterladen:

Betreuer:

Debian Med Packaging Team (QS-Seite, E-Mail-Archiv)
Andreas Tille (QS-Seite)
Olivier Sallou (QS-Seite)
Pierre Gruet (QS-Seite)

Externe Ressourcen:

Homepage [www.broadinstitute.org]

Integrative Genomics Viewer

The Integrative Genomics Viewer (IGV) is a high-performance viewer that efficiently handles large heterogeneous data sets, while providing a smooth and intuitive user experience at all levels of genome resolution. A key characteristic of IGV is its focus on the integrative nature of genomic studies, with support for both array-based and next-generation sequencing data, and the integration of clinical and phenotypic data. Although IGV is often used to view genomic data from public sources, its primary emphasis is to support researchers who wish to visualize and explore their own data sets or those from colleagues. To that end, IGV supports flexible loading of local and remote data sets, and is optimized to provide high-performance data visualization and exploration on standard desktop systems.

Markierungen: Feld: Biologie, Bioinformatik, Implementiert in: implemented-in::java, interface::commandline, Benutzer-Schnittstellen: Graphical User Interface, interface::x11, network::client, Netzwerk-Protokoll: HTTP, Rolle: Programm, Zweck: scope::utility, use::viewing, Arbeitet mit: Biologische Sequenz, X-Window-System: Anwendung

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erweitert

dep: default-jre

Standard Java or Java compatible Runtime
dep: libbatik-java

SVG-Bibliothek von xml.apache.org
dep: libcommons-io-java

Häufig genutzte, nützliche E/A-Klassen
dep: libcommons-lang3-java

Apache Commons Lang - Hilfsklassen
dep: libcommons-math3-java

Java lightweight mathematics and statistics components
dep: libdsiutils-java

Java library of statistical and text data handling tools
dep: libfastutil-java

Java API providing type-specific maps, sets, lists and queues
dep: libgoogle-gson-java

Converts Java objects into their JSON representation
dep: libguava-java

Suite of Google common libraries for Java
dep: libhtsjdk-java

Java API for high-throughput sequencing data (HTS) formats
dep: libicb-utils-java

Java library of utilities to manage files and compute statistics
dep: libjide-oss-java

erweiterbare Swing-Komponentenbibliothek für Java
dep: libjsap-java

Java Simple Argument Parser
dep: liblog4j1.2-java

Bibliothek zum Protokollieren für Java
dep: liblog4j2-java

Apache Log4j - Logging Framework for Java
dep: libnb-absolutelayout-java

Java LayoutManager to allow placement in absolute positions
dep: libprotobuf-java

Java-Anbindungen für »Protocol Buffers«
dep: libswing-layout-java

Erweiterungen für das Layout mit Swing
dep: libxml-commons-external-java

XML Commons - externer Code wie DOM, SAX, JAXP usw.

rec: libmariadb-java

Java database driver for MariaDB and MySQL

igv herunterladen

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