Paket: r-bioc-pfamanalyzer (1.4.0 dfsg-1)

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Homepage [bioconductor.org]

GNU R identification of domain isotypes in pfam data

Protein domains is one of the most import annoation of proteins that are with the Pfam database/tool being (by far) the most used tool. This R package enables the user to read the pfam prediction from both webserver and stand-alone runs into R. It was recently shown most human protein domains exist as multiple distinct variants termed domain isotypes. Different domain isotypes are used in a cell, tissue, and disease- specific manner. Accordingly, it was found that domain isotypes, compared to each other, modulate, or abolish the functionality of a protein domain. This R package enables the identification and classification of such domain isotypes from Pfam data.

Andere Pakete mit Bezug zu r-bioc-pfamanalyzer

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erweitert

dep: r-api-4.0

virtuelles Paket, bereitgestellt durch r-base-core
dep: r-api-bioc-3.19

virtuelles Paket, bereitgestellt durch r-bioc-biocgenerics
dep: r-cran-dplyr

GNU R grammar of data manipulation
dep: r-cran-magrittr

GNU R forward-pipe operator
dep: r-cran-readr

GNU R package to read rectangular text data
dep: r-cran-stringr

Erleichtert die Arbeit mit Strings
dep: r-cran-tibble

GNU R Simple Data Frames

sug: r-bioc-biocstyle

standard styles for vignettes and other Bioconductor documents
sug: r-cran-knitr

GNU R package for dynamic report generation using Literate Programming
sug: r-cran-rmarkdown

Konvertierung von R-Markdown-Dokumenten in verschiedene Formate

r-bioc-pfamanalyzer herunterladen

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