[ Quellcode: gasic ]
Paket: gasic (0.0.r19-7)
Links für gasic
Debian-Ressourcen:
Quellcode-Paket gasic herunterladen:
Betreuer:
- Debian Med Packaging Team (QS-Seite, E-Mail-Archiv)
- Andreas Tille (QS-Seite)
- Navid Fehrenbacher (QS-Seite)
- Roland Fehrenbacher (QS-Seite)
Externe Ressourcen:
- Homepage [sourceforge.net]
Ähnliche Pakete:
genome abundance similarity correction
One goal of sequencing based metagenomic analysis is the quantitative taxonomic assessment of microbial community compositions. However, the majority of approaches either quantify at low resolution (e.g. at phylum level) or have severe problems discerning highly similar species. Yet, accurate quantification on species level is desirable in applications such as metagenomic diagnostics or community comparison. GASiC is a method to correct read alignment results for the ambiguities imposed by similarities of genomes. It has superior performance over existing methods.
Andere Pakete mit Bezug zu gasic
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- dep: bowtie
- Ultraschnelles und speichersparendes Alignmentprogramm für kurze DNA-Sequenzen
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- dep: bowtie2
- Ultraschnelles und speichersparendes Alignmentprogramm für kurze DNA-Sequenzen
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- dep: bwa
- Burrows-Wheeler Aligner
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- dep: python3
- Interaktive objektorientierte Hochsprache (Python3-Standardversion)
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- dep: python3-biopython
- Python-3-Bibliothek für die Bioinformatik
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- dep: python3-matplotlib
- Python-3-System ähnlich Matlab zur Ausgabe von Zeichnungen
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- dep: python3-numpy
- Schnelle Array-Einrichtung für die Sprache Python 3
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: python3-scipy
- Wissenschaftliche Werkzeuge für Python 3
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- dep: seqan-apps
- C library for the analysis of biological sequences
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- sug: gasic-examples
- genome abundance similarity correction (example data)
gasic herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| all | 20,5 kB | 81,0 kB | [Liste der Dateien] |