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/usr/include/vmatch/absdef.h
/usr/include/vmatch/accvirt.pr
/usr/include/vmatch/alignment.h
/usr/include/vmatch/allmclust.pr
/usr/include/vmatch/alphabet.pr
/usr/include/vmatch/alphadef.h
/usr/include/vmatch/applall.pr
/usr/include/vmatch/args.h
/usr/include/vmatch/arraydef.h
/usr/include/vmatch/assertion.h
/usr/include/vmatch/assigndig.pr
/usr/include/vmatch/bestmatch.pr
/usr/include/vmatch/binsearch.pr
/usr/include/vmatch/binsplitvn.pr
/usr/include/vmatch/bitvdist.pr
/usr/include/vmatch/bmhfun.pr
/usr/include/vmatch/boundedgaps.h
/usr/include/vmatch/bwtcode.pr
/usr/include/vmatch/bytehandler.pr
/usr/include/vmatch/ceillog2.pr
/usr/include/vmatch/chain2count.pr
/usr/include/vmatch/chain2dim.pr
/usr/include/vmatch/chaindef.h
/usr/include/vmatch/chainof.pr
/usr/include/vmatch/chainvm.pr
/usr/include/vmatch/chardef.h
/usr/include/vmatch/checkgzip.pr
/usr/include/vmatch/checkonoff.pr
/usr/include/vmatch/chncallparse.pr
/usr/include/vmatch/cleanMUMcand.pr
/usr/include/vmatch/clock.pr
/usr/include/vmatch/clpos.pr
/usr/include/vmatch/cluedist.pr
/usr/include/vmatch/cluster.pr
/usr/include/vmatch/clusterdef.h
/usr/include/vmatch/cmp-tabdef.h
/usr/include/vmatch/cmpalpha.pr
/usr/include/vmatch/cmpmaxd.pr
/usr/include/vmatch/codon.pr
/usr/include/vmatch/codondef.h
/usr/include/vmatch/comparetabs.pr
/usr/include/vmatch/compfilenm.pr
/usr/include/vmatch/compl.h
/usr/include/vmatch/cpridx-data.h
/usr/include/vmatch/cpridx-start.pr
/usr/include/vmatch/debug.pr
/usr/include/vmatch/debugdef.h
/usr/include/vmatch/detmatch.pr
/usr/include/vmatch/detnumofcodes.pr
/usr/include/vmatch/detpfxlen.pr
/usr/include/vmatch/dictmaxsize.pr
/usr/include/vmatch/distri.pr
/usr/include/vmatch/divmodmul.h
/usr/include/vmatch/dlopen.h
/usr/include/vmatch/dpacp.pr
/usr/include/vmatch/dpbitvec.h
/usr/include/vmatch/dpbitvec48.h
/usr/include/vmatch/dpvecdbg.pr
/usr/include/vmatch/drand48.h
/usr/include/vmatch/drand48.pr
/usr/include/vmatch/dstrdup.pr
/usr/include/vmatch/echomatch.pr
/usr/include/vmatch/emimergeesa.h
/usr/include/vmatch/encodedseq.pr
/usr/include/vmatch/encseq-def.h
/usr/include/vmatch/encseq2offset.pr
/usr/include/vmatch/endianess.pr
/usr/include/vmatch/errordef.h
/usr/include/vmatch/esafileend.h
/usr/include/vmatch/esastream.h
/usr/include/vmatch/evaluedef.h
/usr/include/vmatch/evalues.pr
/usr/include/vmatch/experim.h
/usr/include/vmatch/explain.pr
/usr/include/vmatch/extendED.pr
/usr/include/vmatch/extendHD.pr
/usr/include/vmatch/extractcc.h
/usr/include/vmatch/extraproto.h
/usr/include/vmatch/failures.h
/usr/include/vmatch/fastastream.pr
/usr/include/vmatch/fdrewr.h
/usr/include/vmatch/fhandledef.h
/usr/include/vmatch/file.h
/usr/include/vmatch/file2lines.pr
/usr/include/vmatch/filehandle.pr
/usr/include/vmatch/fopen.h
/usr/include/vmatch/frontSEP.pr
/usr/include/vmatch/frontdef.h
/usr/include/vmatch/functrace.h
/usr/include/vmatch/galign.pr
/usr/include/vmatch/galigndef.h
/usr/include/vmatch/genericqueue.pr
/usr/include/vmatch/genericstream.pr
/usr/include/vmatch/genfile.h
/usr/include/vmatch/genfile.pr
/usr/include/vmatch/genstream.h
/usr/include/vmatch/getEqs.pr
/usr/include/vmatch/getbasename.pr
/usr/include/vmatch/getdirname.pr
/usr/include/vmatch/getfasta.pr
/usr/include/vmatch/gextenddef.h
/usr/include/vmatch/gqueue-if.h
/usr/include/vmatch/gqueueproc.h
/usr/include/vmatch/guessprot.pr
/usr/include/vmatch/handleesastream.pr
/usr/include/vmatch/huffman.pr
/usr/include/vmatch/initpost.pr
/usr/include/vmatch/inputsymbol.h
/usr/include/vmatch/intbits.h
/usr/include/vmatch/iter.h
/usr/include/vmatch/iubdef.h
/usr/include/vmatch/karlin.pr
/usr/include/vmatch/keepflags.pr
/usr/include/vmatch/kmer2string.pr
/usr/include/vmatch/logbase.h
/usr/include/vmatch/lrseq.pr
/usr/include/vmatch/mapdemand.pr
/usr/include/vmatch/mapfile.pr
/usr/include/vmatch/markmat.pr
/usr/include/vmatch/match.h
/usr/include/vmatch/matchclust.pr
/usr/include/vmatch/matchlenparm.pr
/usr/include/vmatch/matchsub.pr
/usr/include/vmatch/matsort.pr
/usr/include/vmatch/maxfiles.h
/usr/include/vmatch/maxpref.pr
/usr/include/vmatch/mcontain.pr
/usr/include/vmatch/megabytes.h
/usr/include/vmatch/mergeesa.pr
/usr/include/vmatch/minmax.h
/usr/include/vmatch/mkcld.pr
/usr/include/vmatch/mkidxfilecpy.pr
/usr/include/vmatch/mkskip.pr
/usr/include/vmatch/mlendistrib.pr
/usr/include/vmatch/mokay.pr
/usr/include/vmatch/multidef.h
/usr/include/vmatch/multimatdef.h
/usr/include/vmatch/multireverse.pr
/usr/include/vmatch/multiseq-adv.pr
/usr/include/vmatch/multiseq.pr
/usr/include/vmatch/mumcand.h
/usr/include/vmatch/nomatch.pr
/usr/include/vmatch/onflychain.pr
/usr/include/vmatch/onflychaindef.h
/usr/include/vmatch/opensel.pr
/usr/include/vmatch/optdesc.h
/usr/include/vmatch/optstring.pr
/usr/include/vmatch/outindextab.pr
/usr/include/vmatch/parsedbcl.pr
/usr/include/vmatch/parsemcl.pr
/usr/include/vmatch/parsemultiform.pr
/usr/include/vmatch/parsepp.pr
/usr/include/vmatch/parsequery.pr
/usr/include/vmatch/parsevm.pr
/usr/include/vmatch/pathmax.h
/usr/include/vmatch/procargs.pr
/usr/include/vmatch/procfinal.pr
/usr/include/vmatch/procmatch.pr
/usr/include/vmatch/procopt.pr
/usr/include/vmatch/produceqhits.pr
/usr/include/vmatch/programversion.h
/usr/include/vmatch/programversion.pr
/usr/include/vmatch/prsqualint.pr
/usr/include/vmatch/qsort.pr
/usr/include/vmatch/qsortdef.h
/usr/include/vmatch/qualint.h
/usr/include/vmatch/queryext.h
/usr/include/vmatch/queryindex.pr
/usr/include/vmatch/readgzip.pr
/usr/include/vmatch/readmulti.pr
/usr/include/vmatch/readnextline.pr
/usr/include/vmatch/readvirt.pr
/usr/include/vmatch/recvirt.pr
/usr/include/vmatch/redblack.pr
/usr/include/vmatch/redblackdef.h
/usr/include/vmatch/regionsmerger.pr
/usr/include/vmatch/remdups.pr
/usr/include/vmatch/reverse.pr
/usr/include/vmatch/runquery.pr
/usr/include/vmatch/runself.pr
/usr/include/vmatch/safeadd.h
/usr/include/vmatch/safecast.h
/usr/include/vmatch/safecast.pr
/usr/include/vmatch/safemult.h
/usr/include/vmatch/safescpy.pr
/usr/include/vmatch/scanpaths.pr
/usr/include/vmatch/scoredef.h
/usr/include/vmatch/scorematrix.pr
/usr/include/vmatch/searchdef.h
/usr/include/vmatch/searchpat.pr
/usr/include/vmatch/select.h
/usr/include/vmatch/seterror.pr
/usr/include/vmatch/showalign.pr
/usr/include/vmatch/showibit.pr
/usr/include/vmatch/showmasked.pr
/usr/include/vmatch/showmemsize.pr
/usr/include/vmatch/sixframe.pr
/usr/include/vmatch/skiplist.h
/usr/include/vmatch/skiplist.pr
/usr/include/vmatch/smcontain.pr
/usr/include/vmatch/smwa.pr
/usr/include/vmatch/sortstrings.pr
/usr/include/vmatch/space.pr
/usr/include/vmatch/spacedef.h
/usr/include/vmatch/splitargs.pr
/usr/include/vmatch/substpos.pr
/usr/include/vmatch/superbck.pr
/usr/include/vmatch/threadchain.pr
/usr/include/vmatch/trieins-def.h
/usr/include/vmatch/trieins.pr
/usr/include/vmatch/types.h
/usr/include/vmatch/uedist.pr
/usr/include/vmatch/vbfstrav.pr
/usr/include/vmatch/verbosealpha.pr
/usr/include/vmatch/verifysub.pr
/usr/include/vmatch/virtualdef.h
/usr/include/vmatch/visible.h
/usr/include/vmatch/vmatch.pr
/usr/include/vmatch/vmatfind-def.h
/usr/include/vmatch/vmcluster.pr
/usr/include/vmatch/vmotif-data.h
/usr/include/vmatch/vmotif-start.pr
/usr/include/vmatch/vmrelease.h
/usr/include/vmatch/vnodedef.h
/usr/include/vmatch/vnodes.pr
/usr/include/vmatch/vplugin-interface.h
/usr/include/vmatch/vplugin-open.pr
/usr/include/vmatch/wheels.pr
/usr/include/vmatch/xdrop.pr
/usr/include/vmatch/xdropal1.pr
/usr/include/vmatch/xdropal2.pr
/usr/include/vmatch/xdropdef.h
/usr/include/vmatch/xmlfunc.pr
/usr/include/vmatch/xmlindent.h
/usr/lib/libkurtz-basic.a
/usr/lib/libkurtz-basic.dbg.a
/usr/lib/libkurtz.a
/usr/lib/libkurtz.dbg.a
/usr/lib/libmkvtree.a
/usr/lib/libmkvtree.dbg.a
/usr/lib/libvmatch.a
/usr/lib/libvmatch.dbg.a
/usr/lib/libvmengine.a
/usr/lib/libvmengine.dbg.a
/usr/share/doc/libvmatch-dev/changelog.Debian.gz
/usr/share/doc/libvmatch-dev/copyright
/usr/share/vmatch/SELECT/Makefile.src
/usr/share/vmatch/SELECT/Mksrcmake.sh
/usr/share/vmatch/SELECT/Shareddef
/usr/share/vmatch/SELECT/absdef.h
/usr/share/vmatch/SELECT/alphadef.h
/usr/share/vmatch/SELECT/arraydef.h
/usr/share/vmatch/SELECT/cgvizout.c
/usr/share/vmatch/SELECT/chardef.h
/usr/share/vmatch/SELECT/codondef.h
/usr/share/vmatch/SELECT/dbseqstat.c
/usr/share/vmatch/SELECT/end2end-match.c
/usr/share/vmatch/SELECT/endmatch.c
/usr/share/vmatch/SELECT/errordef.h
/usr/share/vmatch/SELECT/evaluedef.h
/usr/share/vmatch/SELECT/failures.h
/usr/share/vmatch/SELECT/lenpospos.c
/usr/share/vmatch/SELECT/lowcomplex.c
/usr/share/vmatch/SELECT/makefile
/usr/share/vmatch/SELECT/match.h
/usr/share/vmatch/SELECT/maxfiles.h
/usr/share/vmatch/SELECT/mergematches.c
/usr/share/vmatch/SELECT/minmax.h
/usr/share/vmatch/SELECT/mstat.c
/usr/share/vmatch/SELECT/multidef.h
/usr/share/vmatch/SELECT/polyafun.c
/usr/share/vmatch/SELECT/printfasta.c
/usr/share/vmatch/SELECT/qgramout.c
/usr/share/vmatch/SELECT/redblackdef.h
/usr/share/vmatch/SELECT/restrictgap.c
/usr/share/vmatch/SELECT/rightmost.c
/usr/share/vmatch/SELECT/scoredef.h
/usr/share/vmatch/SELECT/sel392.c
/usr/share/vmatch/SELECT/sel5race.c
/usr/share/vmatch/SELECT/selcontext.c
/usr/share/vmatch/SELECT/select.h
/usr/share/vmatch/SELECT/selmatchcontext.c
/usr/share/vmatch/SELECT/selnone.c
/usr/share/vmatch/SELECT/selsplicesite.c
/usr/share/vmatch/SELECT/selstartend.c
/usr/share/vmatch/SELECT/selsuperinc.c
/usr/share/vmatch/SELECT/spacedef.h
/usr/share/vmatch/SELECT/types.h
/usr/share/vmatch/SELECT/visible.h
/usr/share/vmatch/SELECT/vmerout.c
/usr/share/vmatch/SELECT/vmrelease.h
/usr/share/vmatch/SELECT/xmlfunc.c
/usr/share/vmatch/SELECT/xmlindent.h
/usr/share/vmatch/SELECT/xmlout.c