Пакет: bowtie2 (2.5.4-1 и други)

Връзки за bowtie2

Ресурси за Debian:

Изтегляне на пакет-източник bowtie2.

Отговорници:

Външни препратки:

Начална страница [bowtie-bio.sourceforge.net]

Подобни пакети:

ultrafast memory-efficient short read aligner

is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or 1,000s of characters, and particularly good at aligning to relatively long (e.g. mammalian) genomes.

Bowtie 2 indexes the genome with an FM Index to keep its memory footprint small: for the human genome, its memory footprint is typically around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes

Етикети: Biology: Nucleic Acids, Field: Biology, field::biology:bioinformatics, implemented-in::c , User Interface: Command Line, Role: role::program, use::comparing, Works with: Biological Sequence

Други пакети, свързани с bowtie2

зависимости

препоръчани

предложени

enhances

dep: libc6 (>= 2.38)

GNU C Library: Shared libraries
също и виртуален пакет, предлаган от libc6-udeb
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libstdc 6 (>= 14)

GNU Standard C Library v3
dep: perl

Larry Wall's Practical Extraction and Report Language
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: zlib1g (>= 1:1.2.6)

compression library - runtime

sug: bowtie2-examples

Examples for bowtie2

Изтегляне на bowtie2

Изтегляне за всички налични архитектури
Архитектура	Версия	Големина на пакета	Големина след инсталиране	Файлове
mips64el	2.5.4-1 b1	1 416,1 кБ	6 186,0 кБ	[списък на файловете]