Пакет: r-bioc-genomeinfodb (1.40.1 dfsg-1)

Връзки за r-bioc-genomeinfodb

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Начална страница [bioconductor.org]

Подобни пакети:

BioConductor utilities for manipulating chromosome identifiers

This package contains BioConductor utilities for manipulating chromosome and other 'seqname' identifiers.

The Seqnames package contains data and functions that define and allow translation between different chromosome sequence naming conventions (e.g., "chr1" versus "1"), including a function that attempts to place sequence names in their natural, rather than lexicographic, order.

Други пакети, свързани с r-bioc-genomeinfodb

зависимости

препоръчани

предложени

enhances

dep: r-api-4.0

виртуален пакет, предлаган от r-base-core
dep: r-api-bioc-3.19

виртуален пакет, предлаган от r-bioc-biocgenerics
dep: r-bioc-biocgenerics (>= 0.50.0)

generic functions for Bioconductor
dep: r-bioc-genomeinfodbdata (>= 1.2.12)

BioConductor species and taxonomy ID look up tables
dep: r-bioc-iranges (>= 2.38.1)

GNU R low-level containers for storing sets of integer ranges
dep: r-bioc-s4vectors (>= 0.42.1)

BioConductor S4 implementation of vectors and lists
dep: r-bioc-ucsc.utils (>> 1.0.0 ds-1)

Low-level utilities to retrieve data from the UCSC Genome

sug: r-bioc-biocstyle (>= 2.32.1)

standard styles for vignettes and other Bioconductor documents
sug: r-bioc-bsgenome (>= 1.72.0)

BioConductor infrastructure for Biostrings-based genome data packages
sug: r-bioc-genomicalignments (>= 1.40.0)

BioConductor representation and manipulation of short genomic alignments
sug: r-bioc-genomicfeatures (>= 1.56.0)

GNU R tools for making and manipulating transcript centric annotations
sug: r-bioc-genomicranges (>= 1.56.1)

BioConductor representation and manipulation of genomic intervals
sug: r-bioc-rsamtools (>= 2.20.0)

GNU R binary alignment (BAM), variant call (BCF), or tabix file import
sug: r-cran-data.table

GNU R extension of Data.frame
sug: r-cran-knitr

GNU R package for dynamic report generation using Literate Programming
sug: r-cran-r.utils

GNU R various programming utilities
sug: r-cran-runit

GNU R package providing unit testing framework

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