Пакет: r-bioc-genomicranges (1.42.0 dfsg-1)

Връзки за r-bioc-genomicranges

Ресурси за Debian:

Изтегляне на пакет-източник r-bioc-genomicranges.

Отговорници:

Външни препратки:

Начална страница [bioconductor.org]

Подобни пакети:

BioConductor representation and manipulation of genomic intervals

The ability to efficiently store genomic annotations and alignments is playing a central role when it comes to analyze high-throughput sequencing data (a.k.a. NGS data). The package defines general purpose containers for storing genomic intervals as well as more specialized containers for storing alignments against a reference genome.

Други пакети, свързани с r-bioc-genomicranges

зависимости

препоръчани

предложени

enhances

dep: libc6 (>= 2.17) [arm64, ppc64el]

GNU C Library: Shared libraries
също и виртуален пакет, предлаган от libc6-udeb

dep: libc6 (>= 2.4) [не arm64, ppc64el]
dep: r-api-4.0

виртуален пакет, предлаган от r-base-core
dep: r-api-bioc-3.12

виртуален пакет, предлаган от r-bioc-biocgenerics
dep: r-base-core (>= 4.0.3-1)

GNU R core of statistical computation and graphics system
dep: r-bioc-biocgenerics (>= 0.25.3)

generic functions for Bioconductor
dep: r-bioc-genomeinfodb (>= 1.15.2)

BioConductor utilities for manipulating chromosome identifiers
dep: r-bioc-iranges (>= 2.23.9)

GNU R low-level containers for storing sets of integer ranges
dep: r-bioc-s4vectors (>= 0.27.12)

BioConductor S4 implementation of vectors and lists
dep: r-bioc-xvector (>= 0.29.2)

BioConductor representation and manpulation of external sequences

rec: r-bioc-annotate

BioConductor annotation for microarrays
rec: r-bioc-summarizedexperiment

BioConductor assay container
rec: r-cran-digest

GNU R package for 'hash digest' of R data structures
rec: r-cran-runit

GNU R package providing unit testing framework

sug: r-bioc-annotationdbi

GNU R Annotation Database Interface for BioConductor
sug: r-bioc-annotationhub

GNU R client to access AnnotationHub resources
sug: r-bioc-biobase

base functions for Bioconductor
sug: r-bioc-biocstyle

standard styles for vignettes and other Bioconductor documents
sug: r-bioc-biostrings (>= 2.25.3)

GNU R string objects representing biological sequences
sug: r-bioc-bsgenome

BioConductor infrastructure for Biostrings-based genome data packages
sug: r-bioc-deseq2

R package for RNA-Seq Differential Expression Analysis
sug: r-bioc-dexseq

GNU R inference of differential exon usage in RNA-Seq
sug: r-bioc-edger

Empirical analysis of digital gene expression data in R
sug: r-bioc-genomicalignments

BioConductor representation and manipulation of short genomic alignments
sug: r-bioc-genomicfeatures

GNU R tools for making and manipulating transcript centric annotations
sug: r-bioc-gviz

Plotting data and annotation information along genomic coordinates
sug: r-bioc-rsamtools (>= 1.13.53)

GNU R binary alignment (BAM), variant call (BCF), or tabix file import
sug: r-bioc-rtracklayer

GNU R interface to genome browsers and their annotation tracks
sug: r-bioc-variantannotation

BioConductor annotation of genetic variants
sug: r-cran-knitr

GNU R package for dynamic report generation using Literate Programming
sug: r-cran-matrix

GNU R package of classes for dense and sparse matrices

Изтегляне на r-bioc-genomicranges

Изтегляне за всички налични архитектури
Архитектура	Големина на пакета	Големина след инсталиране	Файлове
amd64	1 812,1 кБ	2 674,0 кБ	[списък на файловете]
arm64	1 811,8 кБ	2 674,0 кБ	[списък на файловете]
armel	1 809,6 кБ	2 661,0 кБ	[списък на файловете]
armhf	1 809,9 кБ	2 653,0 кБ	[списък на файловете]
i386	1 812,3 кБ	2 681,0 кБ	[списък на файловете]
mips64el	1 809,4 кБ	2 679,0 кБ	[списък на файловете]
mipsel	1 809,5 кБ	2 674,0 кБ	[списък на файловете]
ppc64el	1 812,2 кБ	2 690,0 кБ	[списък на файловете]
s390x	1 810,9 кБ	2 674,0 кБ	[списък на файловете]