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Cooperative effects by the initiation codon and its flanking regions on translation initiation
scientific article published on 01 August 2001
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1 reference
stated in
Europe PubMed Central
PubMed publication ID
11595172
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11595172 AND SRC:MED&resulttype=core&format=json
retrieved
12 November 2019
title
Cooperative effects by the initiation codon and its flanking regions on translation initiation
(English)
1 reference
stated in
Europe PubMed Central
PubMed publication ID
11595172
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11595172 AND SRC:MED&resulttype=core&format=json
retrieved
12 November 2019
author
Erik Holmgren
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed publication ID
11595172
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11595172 AND SRC:MED&resulttype=core&format=json
retrieved
12 November 2019
author name string
C M Stenström
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed publication ID
11595172
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11595172 AND SRC:MED&resulttype=core&format=json
retrieved
12 November 2019
L A Isaksson
series ordinal
3
1 reference
stated in
Europe PubMed Central
PubMed publication ID
11595172
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11595172 AND SRC:MED&resulttype=core&format=json
retrieved
12 November 2019
language of work or name
English
0 references
publication date
1 August 2001
1 reference
stated in
Europe PubMed Central
PubMed publication ID
11595172
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11595172 AND SRC:MED&resulttype=core&format=json
retrieved
12 November 2019
published in
Gene
1 reference
stated in
Europe PubMed Central
PubMed publication ID
11595172
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11595172 AND SRC:MED&resulttype=core&format=json
retrieved
12 November 2019
volume
273
1 reference
stated in
Europe PubMed Central
PubMed publication ID
11595172
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11595172 AND SRC:MED&resulttype=core&format=json
retrieved
12 November 2019
issue
2
1 reference
stated in
Europe PubMed Central
PubMed publication ID
11595172
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11595172 AND SRC:MED&resulttype=core&format=json
retrieved
12 November 2019
page(s)
259-265
1 reference
stated in
Europe PubMed Central
PubMed publication ID
11595172
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11595172 AND SRC:MED&resulttype=core&format=json
retrieved
12 November 2019
cites work
The Database of Ribosomal Cross-links: an update
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
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7 January 2021
based on heuristic
inferred from DOI database lookup
Amino acid composition of protein termini are biased in different manners.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
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7 January 2021
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inferred from DOI database lookup
Transcription of single-copy hybrid lacZ genes by T7 RNA polymerase in Escherichia coli: mRNA synthesis and degradation can be uncoupled from translation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
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7 January 2021
based on heuristic
inferred from DOI database lookup
Selection of aminoacyl-tRNAs at sense codons: the size of the tRNA variable loop determines whether the immediate 3' nucleotide to the codon has a context effect
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Control of translation by mRNA secondary structure in Escherichia coli. A quantitative analysis of literature data
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
What constitutes the signal for the initiation of protein synthesis on Escherichia coli mRNAs?
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Point mutations that affect translation initiation in the Escherichia coli gal E gene.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Translational enhancement by an element downstream of the initiation codon in Escherichia coli
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Codon choice and potential complementarity between mRNA downstream of the initiation codon and bases 1471 –1480 in 16S ribosomal RNA affects expression ofglnS
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
More than 150 nucleotides flanking the initiation codon contribute to the efficiency of the ribosomal binding site from bacteriophage T7 gene 1
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Posttranscriptional regulatory mechanisms in Escherichia coli
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Recognition of messenger RNA during translational initiation in Escherichia coli
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Influence of mRNA determinants on translation initiation in Escherichia coli
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
An unstructured mRNA region and a 5' hairpin represent important elements of the E. coli translation initiation signal determined by using the bacteriophage T7 gene 1 translation start site
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Initiation of translation in prokaryotes and eukaryotes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Codon bias and gene expression
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Secondary structure as primary determinant of the efficiency of ribosomal binding sites in Escherichia coli
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Enhancement of translational efficiency by the Escherichia coli atpE translational initiation region: its fusion with two human genes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Discrimination by Escherichia coli initiation factor IF3 against initiation on non-canonical codons relies on complementarity rules
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Specific protection of 16 S rRNA by translational initiation factors
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The second to last amino acid in the nascent peptide as a codon context determinant.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
An engineered class I transfer RNA with a class II tertiary fold.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Enhancement of translation by the downstream box does not involve base pairing of mRNA with the penultimate stem sequence of 16S rRNA.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Multiple determinants of functional mRNA stability: sequence alterations at either end of the lacZ gene affect the rate of mRNA inactivation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The role of the AUU initiation codon in the negative feedback regulation of the gene for translation initiation factor IF3 in Escherichia coli.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Information content of binding sites on nucleotide sequences
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The structure of the translational initiation factor IF1 from E.coli contains an oligomer-binding motif
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Codon bias at the 3'-side of the initiation codon is correlated with translation initiation efficiency in Escherichia coli
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Characterization of translational initiation sites in E. coli
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Escherichia coli translation initiation factor 3 discriminates the initiation codon in vivo
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0378-1119(01)00584-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/S0378-1119(01)00584-4
1 reference
stated in
Europe PubMed Central
PubMed publication ID
11595172
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11595172 AND SRC:MED&resulttype=core&format=json
retrieved
12 November 2019
PubMed publication ID
11595172
1 reference
stated in
Europe PubMed Central
PubMed publication ID
11595172
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11595172 AND SRC:MED&resulttype=core&format=json
retrieved
12 November 2019
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