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The invariant U5 snRNA loop 1 sequence is dispensable for the first catalytic step of pre-mRNA splicing in yeast
scientific article published on 01 August 1996
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scholarly article
1 reference
stated in
Europe PubMed Central
PubMed publication ID
8752221
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8752221 AND SRC:MED&resulttype=core&format=json
retrieved
18 October 2019
title
The invariant U5 snRNA loop 1 sequence is dispensable for the first catalytic step of pre-mRNA splicing in yeast
(English)
1 reference
stated in
Europe PubMed Central
PubMed publication ID
8752221
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8752221 AND SRC:MED&resulttype=core&format=json
retrieved
18 October 2019
author name string
R T O'Keefe
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed publication ID
8752221
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8752221 AND SRC:MED&resulttype=core&format=json
retrieved
18 October 2019
C Norman
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed publication ID
8752221
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8752221 AND SRC:MED&resulttype=core&format=json
retrieved
18 October 2019
A J Newman
series ordinal
3
1 reference
stated in
Europe PubMed Central
PubMed publication ID
8752221
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8752221 AND SRC:MED&resulttype=core&format=json
retrieved
18 October 2019
language of work or name
English
0 references
publication date
1 August 1996
1 reference
stated in
Europe PubMed Central
PubMed publication ID
8752221
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8752221 AND SRC:MED&resulttype=core&format=json
retrieved
18 October 2019
published in
Cell
1 reference
stated in
Europe PubMed Central
PubMed publication ID
8752221
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8752221 AND SRC:MED&resulttype=core&format=json
retrieved
18 October 2019
volume
86
1 reference
stated in
Europe PubMed Central
PubMed publication ID
8752221
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8752221 AND SRC:MED&resulttype=core&format=json
retrieved
18 October 2019
issue
4
1 reference
stated in
Europe PubMed Central
PubMed publication ID
8752221
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8752221 AND SRC:MED&resulttype=core&format=json
retrieved
18 October 2019
page(s)
679-689
1 reference
stated in
Europe PubMed Central
PubMed publication ID
8752221
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8752221 AND SRC:MED&resulttype=core&format=json
retrieved
18 October 2019
cites work
A positive selection for mutants lacking orotidine-5'-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The generality of self-splicing RNA: relationship to nuclear mRNA splicing
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Mutations in the conserved loop of human U5 snRNA generate use of novel cryptic 5' splice sites in vivo
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
In vitro assembly of yeast U6 snRNP: a functional assay
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Architecture of the U5 small nuclear RNA
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Structural Features that Give Rise to the Unusual Stability of RNA Hairpins Containing GNRA Loops
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Splice site selection and role of the lariat in a group II intron
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Multiple exon-binding sites in class II self-splicing introns
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The determinants for Sm protein binding to Xenopus U1 and U5 snRNAs are complex and non-identical.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Involvement of U6 snRNA in 5' splice site selection
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Disruption of base pairing between the 5' splice site and the 5' end of U1 snRNA is required for spliceosome assembly
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Antisense probes containing 2-aminoadenosine allow efficient depletion of U5 snRNP from HeLa splicing extracts
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Mutations in U6 snRNA that alter splice site specificity: implications for the active site
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A novel base-pairing interaction between U2 and U6 snRNAs suggests a mechanism for the catalytic activation of the spliceosome
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Dynamic RNA-RNA interactions in the spliceosome
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
In vitro reconstitution of functional yeast U2 snRNPs
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Structure and activities of group II introns
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Mutations in yeast U5 snRNA alter the specificity of 5' splice-site cleavage
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
U5 snRNA interacts with exon sequences at 5′ and 3′ splice sites
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Molecular consequences of specific intron mutations on yeast mRNA splicing in vivo and in vitro
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
An essential yeast snRNA with a U5-like domain is required for splicing in vivo
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Branch nucleophile selection in pre-mRNA splicing: evidence for the bulged duplex model
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Evidence for a base-pairing interaction between U6 small nuclear RNA and 5' splice site during the splicing reaction in yeast
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Association of U6 snRNA with the 5'-splice site region of pre-mRNA in the spliceosome
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Exon mutations uncouple 5' splice site selection from U1 snRNA pairing.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A U1 snRNA:pre-mRNA base pairing interaction is required early in yeast spliceosome assembly but does not uniquely define the 5' cleavage site.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Genetic depletion indicates a late role for U5 snRNP during in vitro spliceosome assembly
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
"Five easy pieces"
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
5' splice site selection in yeast: genetic alterations in base-pairing with U1 reveal additional requirements
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A general two-metal-ion mechanism for catalytic RNA
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Structure of an unusually stable RNA hairpin
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
mRNA splicing and autocatalytic introns: distant cousins or the products of chemical determinism?
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Guides to the heart of the spliceosome
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Site-specific cross-linking of mammalian U5 snRNP to the 5' splice site before the first step of pre-mRNA splicing
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A compensatory base change in U1 snRNA suppresses a 5' splice site mutation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0092-8674(00)80140-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/S0092-8674(00)80140-3
1 reference
stated in
Europe PubMed Central
PubMed publication ID
8752221
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8752221 AND SRC:MED&resulttype=core&format=json
retrieved
18 October 2019
PubMed publication ID
8752221
1 reference
stated in
Europe PubMed Central
PubMed publication ID
8752221
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8752221 AND SRC:MED&resulttype=core&format=json
retrieved
18 October 2019
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