(Q39686972)

English

PRIMROSE: a computer program for generating and estimating the phylogenetic range of 16S rRNA oligonucleotide probes and primers in conjunction with the RDP-II database

scientific article published on August 2002

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

PRIMROSE: a computer program for generating and estimating the phylogenetic range of 16S rRNA oligonucleotide probes and primers in conjunction with the RDP-II database (English)

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

0 references

1 reference

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inferred from title

computer program

1 reference

based on heuristic

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Kevin E. Ashelford

object named as

Kevin E Ashelford

1

0 references

author name string

Andrew J Weightman

2

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

John C Fry

3

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

language of work or name

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publication date

1 August 2002

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

number of pages

9

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Nucleic Acids Research

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

30

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

15

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

3481-3489

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

New degenerate Cytophaga-Flexibacter-Bacteroides-specific 16S ribosomal DNA-targeted oligonucleotide probes reveal high bacterial diversity in River Taff epilithon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137075

14 September 2017

Development and evaluation of functional gene arrays for detection of selected genes in the environment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137075

14 September 2017

Direct detection of 16S rRNA in soil extracts by using oligonucleotide microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137075

14 September 2017

Bacterial populations colonizing and degrading rice straw in anoxic paddy soil

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137075

14 September 2017

The RDP-II (Ribosomal Database Project).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137075

14 September 2017

Ribosomal RNA-targeted nucleic acid probes for studies in microbial ecology

1 reference

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14 September 2017

Phylogenetic characterization and in situ detection of a Cytophaga-Flexibacter-Bacteroides phylogroup bacterium in Tuber borchii vittad. Ectomycorrhizal mycelium

1 reference

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14 September 2017

Application of sequence-specific labeled 16S rRNA gene oligonucleotide probes for genetic profiling of cyanobacterial abundance and diversity by array hybridization

1 reference

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14 September 2017

In situ analysis of sulfate-reducing bacteria related to Desulfocapsa thiozymogenes in the chemocline of meromictic Lake Cadagno (Switzerland)

1 reference

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14 September 2017

High bacterial diversity in permanently cold marine sediments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137075

14 September 2017

Community analysis of biofilters using fluorescence in situ hybridization including a new probe for the Xanthomonas branch of the class Proteobacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137075

14 September 2017

Flow cytometric analysis of the in situ accessibility of Escherichia coli 16S rRNA for fluorescently labeled oligonucleotide probes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137075

14 September 2017

Degradative capacities and 16S rRNA-targeted whole-cell hybridization of sulfate-reducing bacteria in an anaerobic enrichment culture utilizing alkylbenzenes from crude oil.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137075

14 September 2017

Software to determine optimal oligonucleotide sequences based on hybridization simulation data.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137075

14 September 2017

Phylogenetic identification and in situ detection of individual microbial cells without cultivation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137075

14 September 2017

Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137075

14 September 2017

A computer program for selection of oligonucleotide primers for polymerase chain reactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137075

14 September 2017

OLIGSCAN: a computer program to assist in the design of PCR primers homologous to multiple DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137075

15 June 2018

Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum cytophaga-flavobacter-bacteroides in the natural environment.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137075

20 August 2018

16S rRNA-targeted oligonucleotide probes for the in situ detection of members of the phylum Cytophaga-Flavobacterium-Bacteroides

1 reference

https://pubmed.ncbi.nlm.nih.gov/12140334

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

OSP: a computer program for choosing PCR and DNA sequencing primers

1 reference

https://pubmed.ncbi.nlm.nih.gov/12140334

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKF450

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

ResearchGate publication ID

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