(Q36088911)

12 August 2017

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title

Remote control of gene transcription (English)

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12 August 2017

Adam G West

1

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Peter Fraser

object named as

Peter Fraser

series ordinal

2

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publication date

1 April 2005

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12 August 2017

published in

Human Molecular Genetics

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12 August 2017

volume

14 Spec No 1

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12 August 2017

page(s)

R101-11

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A long-range Shh enhancer regulates expression in the developing limb and fin and is associated with preaxial polydactyly

12 August 2017

cites work

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Scanning Human Gene Deserts for Long-Range Enhancers

21 January 2018

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Long-range activation of Sox9 in Odd Sex (Ods) mice.

21 January 2018

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Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs

21 January 2018

1 reference

Promoter-proximal tethering elements regulate enhancer-promoter specificity in the Drosophila Antennapedia complex

21 January 2018

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Chromatin architecture of the human genome: gene-rich domains are enriched in open chromatin fibers

21 January 2018

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Physical properties of a genomic condensed chromatin fragment

21 January 2018

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Heterochromatin and epigenetic control of gene expression

21 January 2018

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Long-range control of gene expression: emerging mechanisms and disruption in disease

21 January 2018

1 reference

Molecular and cytogenetic analysis of the spreading of X inactivation in X;autosome translocations

21 January 2018

1 reference

Insulators: many functions, many mechanisms.

21 January 2018

1 reference

β-Globin gene inactivation by DNA translocation in γβ-thalassaemi

21 January 2018

1 reference

The "beta-like-globin" gene domain in human erythroid cells

21 January 2018

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Position-independent, high-level expression of the human beta-globin gene in transgenic mice

21 January 2018

1 reference

21 January 2018

Locus control regions

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Heterochromatin effects on the frequency and duration of LCR-mediated gene transcription.

21 January 2018

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A complex chromatin landscape revealed by patterns of nuclease sensitivity and histone modification within the mouse beta-globin locus

21 January 2018

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Conserved CTCF insulator elements flank the mouse and human beta-globin loci

21 January 2018

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The barrier function of an insulator couples high histone acetylation levels with specific protection of promoter DNA from methylation

21 January 2018

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Beta-globin gene switching and DNase I sensitivity of the endogenous beta-globin locus in mice do not require the locus control region

21 January 2018

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The locus control region is necessary for gene expression in the human beta-globin locus but not the maintenance of an open chromatin structure in erythroid cells

21 January 2018

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Intergenic transcription and developmental remodeling of chromatin subdomains in the human beta-globin locus

21 January 2018

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Bystander gene activation by a locus control region

21 January 2018

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A global control region defines a chromosomal regulatory landscape containing the HoxD cluster

21 January 2018

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Campomelic dysplasia and autosomal sex reversal caused by mutations in an SRY-related gene

21 January 2018

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Autosomal sex reversal and campomelic dysplasia are caused by mutations in and around the SRY-related gene SOX9

21 January 2018

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Deletion of long-range regulatory elements upstream of SOX9 causes campomelic dysplasia

21 January 2018

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Screening of the 1 Mb SOX9 5' control region by array CGH identifies a large deletion in a case of campomelic dysplasia with XY sex reversal

21 January 2018

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Disruption of a long-range cis-acting regulator for Shh causes preaxial polydactyly

21 January 2018

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Looping and interaction between hypersensitive sites in the active beta-globin locus

21 January 2018

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Capturing chromosome conformation

21 January 2018

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Long-range chromatin regulatory interactions in vivo

21 January 2018

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The beta-globin nuclear compartment in development and erythroid differentiation

21 January 2018

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Multiple interactions between regulatory regions are required to stabilize an active chromatin hub.

21 January 2018

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The active spatial organization of the beta-globin locus requires the transcription factor EKLF

21 January 2018

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Genome-wide localization of the nuclear transport machinery couples transcriptional status and nuclear organization

21 January 2018

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Expression of alpha- and beta-globin genes occurs within different nuclear domains in haemopoietic cells

21 January 2018

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Dynamic repositioning of genes in the nucleus of lymphocytes preparing for cell division

21 January 2018

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Spatial organization of active and inactive genes and noncoding DNA within chromosome territories

21 January 2018

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A genetic analysis of chromosome territory looping: diverse roles for distal regulatory elements.

21 January 2018

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Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription

21 January 2018

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Spatial relationship between transcription sites and chromosome territories

21 January 2018

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Transcription-dependent spatial arrangements of CFTR and adjacent genes in human cell nuclei

21 January 2018

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Active genes dynamically colocalize to shared sites of ongoing transcription

21 January 2018

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Predicting three-dimensional genome structure from transcriptional activity.

21 January 2018

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The concept of self-organization in cellular architecture

21 January 2018

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Making contacts on a nucleic acid polymer

21 January 2018

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Quantitative comparison of DNA looping in vitro and in vivo: chromatin increases effective DNA flexibility at short distances

21 January 2018

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Nongenic transcription, gene regulation and action at a distance

21 January 2018

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Elongation by RNA polymerase II: the short and long of it

21 January 2018

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HS2 enhancer function is blocked by a transcriptional terminator inserted between the enhancer and the promoter

21 January 2018

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An insulator blocks spreading of histone acetylation and interferes with RNA polymerase II transfer between an enhancer and gene

21 January 2018

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Distant liaisons: long-range enhancer-promoter interactions in Drosophila.

21 January 2018

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Looping versus linking: toward a model for long-distance gene activation

21 January 2018

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Drosophila nipped-B protein supports sister chromatid cohesion and opposes the stromalin/Scc3 cohesion factor to facilitate long-range activation of the cut gene

21 January 2018

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CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus

21 January 2018

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Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

21 January 2018

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CTCF-binding sites flank CTG/CAG repeats and form a methylation-sensitive insulator at the DM1 locus

21 January 2018

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Epigenetic analysis of the Dlk1-Gtl2 imprinted domain on mouse chromosome 12: implications for imprinting control from comparison with Igf2-H19.

21 January 2018

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Thyroid hormone-regulated enhancer blocking: cooperation of CTCF and thyroid hormone receptor

21 January 2018

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Imprinting regulation of the murine Meg1/Grb10 and human GRB10 genes; roles of brain-specific promoters and mouse-specific CTCF-binding sites.

21 January 2018

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An evolutionarily conserved putative insulator element near the 3' boundary of the imprinted Igf2/H19 domain

21 January 2018

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Boundaries between chromosomal domains of X inactivation and escape bind CTCF and lack CpG methylation during early development

21 January 2018

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Both CTCF-dependent and -independent insulators are found between the mouse T cell receptor alpha and Dad1 genes

21 January 2018

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CTCF-dependent enhancer blockers at the upstream region of the chicken alpha-globin gene domain

21 January 2018

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The c-myc insulator element and matrix attachment regions define the c-myc chromosomal domain

21 January 2018

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CTCF, a candidate trans-acting factor for X-inactivation choice

21 January 2018

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A differentially methylated imprinting control region within the Kcnq1 locus harbors a methylation-sensitive chromatin insulator

21 January 2018

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Insulation of enhancer-promoter communication by a gypsy transposon insert in the Drosophila cut gene: cooperation between suppressor of hairy-wing and modifier of mdg4 proteins

21 January 2018

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The 5'-HS4 chicken beta-globin insulator is a CTCF-dependent nuclear matrix-associated element

21 January 2018

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A chromatin insulator determines the nuclear localization of DNA.

21 January 2018

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Nuclear location of a chromatin insulator in Drosophila melanogaster

21 January 2018

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Visualization of chromatin domains created by the gypsy insulator of Drosophila

21 January 2018

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Enhancer action in trans is permitted throughout the Drosophila genome

21 January 2018

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Large scale mapping of methylcytosines in CTCF-binding sites in the human H19 promoter and aberrant hypomethylation in human bladder cancer

21 January 2018

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Poly(ADP-ribosyl)ation regulates CTCF-dependent chromatin insulation.

21 January 2018

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Chromatin loosening by poly(ADP)-ribose polymerase (PARP) at Drosophila puff loci

21 January 2018

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Loss of insulator activity by paired Su(Hw) chromatin insulators.

21 January 2018

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Effects of cis arrangement of chromatin insulators on enhancer-blocking activity.

21 January 2018

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The centrosomal protein CP190 is a component of the gypsy chromatin insulator

21 January 2018

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Interaction between the GAGA factor and Mod(mdg4) proteins promotes insulator bypass in Drosophila

21 January 2018

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A novel cis-regulatory element, the PTS, mediates an anti-insulator activity in the Drosophila embryo

21 January 2018

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The promoter targeting sequence facilitates and restricts a distant enhancer to a single promoter in the Drosophila embryo

21 January 2018

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The functional analysis of insulator interactions in the Drosophila embryo

21 January 2018

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A test of insulator interactions in Drosophila.

21 January 2018

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Protein:protein interactions and the pairing of boundary elements in vivo

21 January 2018

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The protein CTCF is required for the enhancer blocking activity of vertebrate insulators

21 January 2018

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Recruitment of histone modifications by USF proteins at a vertebrate barrier element

21 January 2018

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Position-effect protection and enhancer blocking by the chicken beta-globin insulator are separable activities

21 January 2018

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A novel boundary element may facilitate independent gene regulation in the Antennapedia complex of Drosophila

21 January 2018

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Prospects and implications of using chromatin insulators in gene therapy and transgenesis

21 January 2018

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Transitions in distinct histone H3 methylation patterns at the heterochromatin domain boundaries

21 January 2018

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Chromatin boundaries in budding yeast: the nuclear pore connection

21 January 2018

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Barrier proteins remodel and modify chromatin to restrict silenced domains

21 January 2018

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Chromosomal boundaries in S. cerevisiae.

21 January 2018

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Chromatin domain boundaries delimited by a histone-binding protein in yeast

21 January 2018

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Braking the silence: how heterochromatic gene repression is stopped in its tracks.

21 January 2018

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Correlation between histone lysine methylation and developmental changes at the chicken beta-globin locus

21 January 2018

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Transitions in histone acetylation reveal boundaries of three separately regulated neighboring loci

21 January 2018

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Antigen receptor loci poised for V(D)J rearrangement are broadly associated with BRG1 and flanked by peaks of histone H3 dimethylated at lysine 4

21 January 2018

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Making good neighbors: The right fence for the right job

21 January 2018

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21 January 2018

Identifiers

DOI

10.1093/HMG/DDI104

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12 August 2017

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