(Q33728652)

28 July 2017

title

Balancing selection maintains a form of ERAP2 that undergoes nonsense-mediated decay and affects antigen presentation (English)

1 reference

NISC Comparative Sequencing Program

28 July 2017

author

7

object named as

NISC Comparative Sequencing Program

1 reference

28 July 2017

13

Eric D Green

1 reference

28 July 2017

10

Carlos D Bustamante

1 reference

28 July 2017

12

Andrew G Clark

1 reference

28 July 2017

5

Shih-Queen Lee-Lin

1 reference

28 July 2017

6

Belen Hurle

1 reference

28 July 2017

Aida M Andrés

1

1 reference

28 July 2017

Megan Y Dennis

2

1 reference

28 July 2017

Warren W Kretzschmar

3

1 reference

28 July 2017

Jennifer L Cannons

4

1 reference

28 July 2017

Pamela L Schwartzberg

8

1 reference

28 July 2017

Scott H Williamson

9

1 reference

28 July 2017

Rasmus Nielsen

11

1 reference

28 July 2017

publication date

14 October 2010

1 reference

28 July 2017

1 reference

28 July 2017

volume

6

1 reference

28 July 2017

issue

10

1 reference

28 July 2017

page(s)

e1001157

1 reference

Creative Commons CC0 License

28 July 2017

copyright license

start time

14 October 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

describes a project that uses

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2954825/fullTextXML

inferred from PubMed Central ID database lookup

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Endoplasmic reticulum aminopeptidase associated with antigen processing defines the composition and structure of MHC class I peptide repertoire in normal and virus-infected cells

28 July 2018

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28 July 2018

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Genome-wide association study of ankylosing spondylitis identifies non-MHC susceptibility loci

28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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Co-evolution of KIR2DL3 with HLA-C in a human population retaining minimal essential diversity of KIR and HLA class I ligands

28 July 2018

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Balancing selection of a frame-shift mutation in the MRC2 gene accounts for the outbreak of the Crooked Tail Syndrome in Belgian Blue Cattle

28 July 2018

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28 July 2018

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Investigating the genetic association between ERAP1 and ankylosing spondylitis

28 July 2018

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The ERAP2 gene is associated with preeclampsia in Australian and Norwegian populations

28 July 2018

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Antigen processing influences HIV-specific cytotoxic T lymphocyte immunodominance

28 July 2018

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A common variant associated with dyslexia reduces expression of the KIAA0319 gene

28 July 2018

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28 July 2018

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Altered global gene expression in first trimester placentas of women destined to develop preeclampsia

28 July 2018

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Endoplasmic reticulum aminopeptidase associated with antigen processing regulates quality of processed peptides presented by MHC class I molecules

28 July 2018

1 reference

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Altered expression of endoplasmic reticulum aminopeptidases ERAP1 and ERAP2 in transformed non-lymphoid human tissues

28 July 2018

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SNP-specific array-based allele-specific expression analysis

28 July 2018

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Natural selection has driven population differentiation in modern humans

28 July 2018

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Coping with loss of perfection in the MHC class I peptide repertoire

28 July 2018

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Association scan of 14,500 nonsynonymous SNPs in four diseases identifies autoimmunity variants

28 July 2018

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Association of antigen processing machinery and HLA class I defects with clinicopathological outcome in cervical carcinoma

28 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Localizing recent adaptive evolution in the human genome

28 July 2018

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A mutation in the myostatin gene increases muscle mass and enhances racing performance in heterozygote dogs

28 July 2018

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Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

28 July 2018

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Inactivation of RB1 in mantle-cell lymphoma detected by nonsense-mediated mRNA decay pathway inhibition and microarray analysis.

28 July 2018

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No association of type 1 diabetes with a functional polymorphism of the LRAP gene

28 July 2018

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Endoplasmic reticulum aminopeptidase 1 (ERAP1) trims MHC class I-presented peptides in vivo and plays an important role in immunodominance.

28 July 2018

1 reference

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Scan of human genome reveals no new Loci under ancient balancing selection

28 July 2018

1 reference

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Spread of an inactive form of caspase-12 in humans is due to recent positive selection

28 July 2018

1 reference

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In vivo role of ER-associated peptidase activity in tailoring peptides for presentation by MHC class Ia and class Ib molecules

28 July 2018

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A map of recent positive selection in the human genome

28 July 2018

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28 July 2018

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Natural selection on protein-coding genes in the human genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Complexity, contradictions, and conundrums: studying post-proteasomal proteolysis in HLA class I antigen presentation.

28 July 2018

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Initial sequence of the chimpanzee genome and comparison with the human genome

28 July 2018

1 reference

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A scan for positively selected genes in the genomes of humans and chimpanzees

28 July 2018

1 reference

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Regulation of the human leukocyte-derived arginine aminopeptidase/endoplasmic reticulum-aminopeptidase 2 gene by interferon-gamma

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Processing of antigenic peptides by aminopeptidases

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Immune selection for altered antigen processing leads to cytotoxic T lymphocyte escape in chronic HIV-1 infection

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Proteasome and peptidase function in MHC-class-I-mediated antigen presentation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Adipocyte-derived leucine aminopeptidase suppresses angiogenesis in human endometrial carcinoma via renin-angiotensin system

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

The International HapMap Project

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Libsequence: a C class library for evolutionary genetic analysis.

28 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Human leukocyte-derived arginine aminopeptidase. The third member of the oxytocinase subfamily of aminopeptidases

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

The ER aminopeptidase ERAP1 enhances or limits antigen presentation by trimming epitopes to 8-9 residues

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

A strong signature of balancing selection in the 5' cis-regulatory region of CCR5.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Identification of 33 polymorphisms in the adipocyte-derived leucine aminopeptidase (ALAP) gene and possible association with hypertension

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Generating samples under a Wright-Fisher neutral model of genetic variation

28 July 2018

1 reference

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A New Statistical Method for Haplotype Reconstruction from Population Data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Characterization of recombinant human adipocyte-derived leucine aminopeptidase expressed in Chinese hamster ovary cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Cystic Fibrosis Heterozygote Resistance to Cholera Toxin in the Cystic Fibrosis Mouse Model

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

The coalescent process in models with selection and recombination

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

A test of neutral molecular evolution based on nucleotide data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Nucleotide substitution at major histocompatibility complex class II loci: evidence for overdominant selection

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Allelic genealogy under overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2954825

Heterozygosity at individual amino acid sites: extremely high levels for HLA-A and -B genes

28 July 2018

1 reference

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Split decomposition: a new and useful approach to phylogenetic analysis of distance data

28 July 2018

1 reference

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Pathogen-Driven Selection and Worldwide HLA Class I Diversity

28 July 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

Unusual selection on the KIR3DL1/S1 natural killer cell receptor in africans

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

Global diversity and evidence for coevolution of KIR and HLA.

21 January 2018

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https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

The final touches make perfect the peptide-MHC class I repertoire

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

Expression of endoplasmic reticulum aminopeptidases in EBV-B cell lines from healthy donors and in leukemia/lymphoma, carcinoma, and melanoma cell lines.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

Association of a specific ERAP1/ARTS1 haplotype with disease susceptibility in ankylosing spondylitis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

Single nucleotide polymorphisms in antigen processing machinery component ERAP1 significantly associate with clinical outcome in cervical carcinoma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

Genome-wide analysis of transcript isoform variation in humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

Concerted peptide trimming by human ERAP1 and ERAP2 aminopeptidase complexes in the endoplasmic reticulum.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

A strategy for disease gene identification through nonsense-mediated mRNA decay inhibition

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

The aminopeptidase ERAAP shapes the peptide repertoire displayed by major histocompatibility complex class I molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

In the absence of aminopeptidase ERAAP, MHC class I molecules present many unstable and highly immunogenic peptides.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

Not such a dismal science: the economics of protein synthesis, folding, degradation and antigen processing

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

Circulating angiogenic factors and the risk of preeclampsia

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

Functional analyses of glycyl-tRNA synthetase mutations suggest a key role for tRNA-charging enzymes in peripheral axons

21 January 2018

1 reference

https://api.crossref.org/works/10.1371/JOURNAL.PGEN.1001157

The effects of local selection, balanced polymorphism and background selection on equilibrium patterns of genetic diversity in subdivided populations

21 January 2018

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12 December 2020

Natural selection at major histocompatibility complex loci of vertebrates

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12 December 2020

A limited role for balancing selection

1 reference

12 December 2020

The role of endoplasmic reticulum-associated aminopeptidase 1 in immunity to infection and in cross-presentation

1 reference

12 December 2020

Genetic variation of antigen processing machinery components and association with cervical carcinoma

1 reference

12 December 2020

10.1371/JOURNAL.PGEN.1001157

Identifiers

DOI

1 reference

28 July 2017

1 reference

28 July 2017

1 reference