(Q33714197)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

title

De novo assembly and analysis of RNA-seq data (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

1 reference

1 reference

1 reference

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Malachi Griffith

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Timothee Cezard

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Steven Jones

27

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Pamela A. Hoodless

28

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Inanc Birol

29

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

3

Readman Chiu

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

author name string

Gordon Robertson

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Jacqueline Schein

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Richard Corbett

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Matthew Field

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Karen Mungall

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Sam Lee

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Hisanaga Mark Okada

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Jenny Q Qian

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Anthony Raymond

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Nina Thiessen

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Yaron S Butterfield

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Richard Newsome

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Simon K Chan

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Rong She

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Richard Varhol

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Baljit Kamoh

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Anna-Liisa Prabhu

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Angela Tam

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

YongJun Zhao

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Richard A Moore

24

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Martin Hirst

25

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

Marco A Marra

26

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

publication date

10 October 2010

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

volume

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

issue

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

15 February 2020

page(s)

909-912

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

ASTD: The Alternative Splicing and Transcript Diversity database

15 February 2020

cites work

1 reference

12 December 2020

Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data

1 reference

12 December 2020

BLAT—The BLAST-Like Alignment Tool

1 reference

12 December 2020

Optimal spliced alignments of short sequence reads

1 reference

12 December 2020

Problems and solutions for estimating indel rates and length distributions

1 reference

12 December 2020

Into the unknown: expression profiling without genome sequence information in CHO by next generation sequencing

1 reference

12 December 2020

Microindel detection in short-read sequence data

1 reference

12 December 2020

Detection of splice junctions from paired-end RNA-seq data by SpliceMap.

1 reference

12 December 2020

TopHat: discovering splice junctions with RNA-Seq

1 reference

12 December 2020

Assembling genomes using short-read sequencing technology.

1 reference

12 December 2020

Alternative expression analysis by RNA sequencing

1 reference

12 December 2020

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

1 reference

12 December 2020

Sense from sequence reads: methods for alignment and assembly

1 reference

12 December 2020

The transcriptional landscape of the yeast genome defined by RNA sequencing

1 reference

12 December 2020

Computation for ChIP-seq and RNA-seq studies

1 reference

12 December 2020

Comprehensive splice-site analysis using comparative genomics

1 reference

12 December 2020

The UCSC Genome Browser database: update 2010

1 reference

12 December 2020

RNA-Seq gene expression estimation with read mapping uncertainty

1 reference

12 December 2020

ABySS: a parallel assembler for short read sequence data

1 reference

12 December 2020

Fast and SNP-tolerant detection of complex variants and splicing in short reads

1 reference

12 December 2020

Modeling non-uniformity in short-read rates in RNA-Seq data

1 reference

12 December 2020

NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

1 reference

12 December 2020

1 reference

12 December 2020

Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs

1 reference

12 December 2020

Stochastic noise in splicing machinery

1 reference

12 December 2020

De novo transcriptome assembly with ABySS.

1 reference

12 December 2020

Fast and accurate short read alignment with Burrows-Wheeler transform

1 reference

12 December 2020

Automated generation of heuristics for biological sequence comparison

1 reference

12 December 2020

How to map billions of short reads onto genomes

1 reference

12 December 2020

1 reference

12 December 2020

Global and unbiased detection of splice junctions from RNA-seq data

1 reference

12 December 2020

Identifiers

DOI

10.1038/NMETH.1517

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20935650 AND SRC:MED&resulttype=core&format=json

Dimensions Publication ID

15 February 2020

1032102367

0 references

1 reference