(Q28142746)

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Kinetics versus thermodynamics in protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

An all atom force field for simulations of proteins and nucleic acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

The OPLS [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Do salt bridges stabilize proteins? A continuum electrostatic analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Thermodynamics and mechanism of alpha helix initiation in alanine and valine peptides.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Atomic solvation parameters applied to molecular dynamics of proteins in solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Inclusion of solvation free energy with molecular mechanics energy: Alanyl dipeptide as a test case

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Excluded volume approximation to protein-solvent interaction. The solvent contact model

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Minimization of polypeptide energy. I. Preliminary structures of bovine pancreatic ribonuclease S-peptide

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

A simplified representation of protein conformations for rapid simulation of protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Analytical approximation to the accessible surface area of proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Electrostatic interactions in macromolecules: theory and applications

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Semianalytical treatment of solvation for molecular mechanics and dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Calculation of conformational ensembles from potentials of mean force. An approach to the knowledge-based prediction of local structures in globular proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

"New View" of Protein Folding Reconciled with the Old Through Multiple Unfolding Simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Contribution of hydration to protein folding thermodynamics. II. The entropy and Gibbs energy of hydration

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Contribution of hydration to protein folding thermodynamics. I. The enthalpy of hydration

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Contribution of hydration and non-covalent interactions to the heat capacity effect on protein unfolding

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Gaussian neighborhood: a new measure of accessibility for residues of protein molecules.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Structural and genetic analysis of protein stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Molecular dynamics simulations of the unfolding of an alpha-helical analogue of ribonuclease A S-peptide in water

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Side-chain torsional potentials: effect of dipeptide, protein, and solvent environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Picosecond dynamics of tyrosine side chains in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Protein engineering of cytochrome c by semisynthesis: substitutions at glutamic acid 66.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Internal cavities and buried waters in globular proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Demonstration of positionally disordered water within a protein hydrophobic cavity by NMR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Structural and energetic responses to cavity-creating mutations in hydrophobic cores: observation of a buried water molecule and the hydrophilic nature of such hydrophobic cavities

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Molecular dynamics simulation of protein denaturation: solvation of the hydrophobic cores and secondary structure of barnase

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Decomposition of the Free Energy of a System in Terms of Specific Interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Additivity principles in biochemistry

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Accurate simulation of protein dynamics in solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Differential stability of beta-sheets and alpha-helices in beta-lactamase: a high temperature molecular dynamics study of unfolding intermediates

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Simulation of the thermal denaturation of hen egg white lysozyme: trapping the molten globule state

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

A model of the molten globule state from molecular dynamics simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Hydration of proteins. A comparison of experimental residence times of water molecules solvating the bovine pancreatic trypsin inhibitor with theoretical model calculations

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Molecular dynamics simulations of protein unfolding and limited refolding: characterization of partially unfolded states of ubiquitin in 60% methanol and in water

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

A 500 ps molecular dynamics simulation study of interleukin-1 beta in water. Correlation with nuclear magnetic resonance spectroscopy and crystallography.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Active site dynamics of acyl-chymotrypsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Investigation of the solution structure of chymotrypsin inhibitor 2 using molecular dynamics: comparison to x-ray crystallographic and NMR data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Thermodynamics of melittin tetramerization determined by circular dichroism and implications for protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

The contribution of vibrational entropy to molecular association. The dimerization of insulin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Protein hydration elucidated by molecular dynamics simulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Hydrated myoglobin's anharmonic fluctuations are not primarily due to dihedral transitions

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Dynamics of metmyoglobin crystals investigated by nuclear gamma resonance absorption

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Folding of chymotrypsin inhibitor 2. 1. Evidence for a two-state transition

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Theory for the folding and stability of globular proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Estimation of changes in side chain configurational entropy in binding and folding: general methods and application to helix formation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

On the entropy of protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Calorimetric determination of the enthalpy change for the alpha-helix to coil transition of an alanine peptide in water

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

21 January 2018

Ion-pairs in proteins

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Electrostatic effects and hydrogen exchange behaviour in proteins. The pH dependence of exchange rates in lysozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Solution conformations and thermodynamics of structured peptides: molecular dynamics simulation with an implicit solvation model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

Protein Folding: A Perspective from Theory and Experiment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

An Efficient Mean Solvation Force Model for Use in Molecular Dynamics Simulations of Proteins in Aqueous Solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

A metastable state in folding simulations of a protein model

21 January 2018

0 references

Monte Carlo simulation of water behavior around the dipeptide N-acetylalanyl-N-methylamide

0 references

Solvent effects on protein motion and protein effects on solvent motion. Dynamics of the active site region of lysozyme

0 references

Urea effects on protein stability: Hydrogen bonding and the hydrophobic effect

0 references

Hidden thermodynamics of mutant proteins: a molecular dynamics analysis

0 references

First-principles calculation of the folding free energy of a three-helix bundle protein

0 references

Acid and thermal denaturation of barnase investigated by molecular dynamics simulations

0 references

Dielectric studies of protein hydration and hydration-induced flexibility

0 references

The price of lost freedom: entropy of bimolecular complex formation

0 references

Simulation of activation free energies in molecular systems

0 references

Heat capacity of proteins. I. Partial molar heat capacity of individual amino acid residues in aqueous solution: hydration effect

0 references

Protein dynamics in solution and in a crystalline environment: a molecular dynamics study

0 references

Solvent effects on protein association and protein folding

0 references

Microfolding: Conformational probability map for the alanine dipeptide in water from molecular dynamics simulations

0 references

The folding of an enzyme. II. Substructure of barnase and the contribution of different interactions to protein stability

0 references

Configurational distribution of denatured phosphoglycerate kinase

0 references

On the decomposition of free energies

0 references

Computer simulation as a tool for tracing the conformational differences between proteins in solution and in the crystalline state

0 references

Identifiers

DOI

10.1002/(SICI)1097-0134(19990501)35:2<133::AID-PROT1>3.0.CO;2-N

1 reference

Consolidated OpenCitations Corpus – April 2017

1 reference

Consolidated OpenCitations Corpus – April 2017

PubMed publication ID

10223287

1 reference

Consolidated OpenCitations Corpus – April 2017