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Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families.
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scholarly article
2 references
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PubMed
PubMed publication ID
10322435
retrieved
1 December 2016
stated in
Europe PubMed Central
PubMed publication ID
10322435
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10322435 AND SRC:MED&resulttype=core&format=json
retrieved
7 December 2019
review article
1 reference
stated in
Europe PubMed Central
title
Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families
(English)
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10322435
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10322435 AND SRC:MED&resulttype=core&format=json
retrieved
7 December 2019
main subject
Saccharomyces cerevisiae
0 references
Putative ATP-dependent RNA helicase DBP6 YNR038W
1 reference
stated in
GOA release 2020-03-11
Putative ATP-dependent RNA helicase YKR024C
1 reference
stated in
GOA release 2020-03-11
author
Jesus De La Cruz
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10322435
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10322435 AND SRC:MED&resulttype=core&format=json
retrieved
7 December 2019
Dieter Kressler
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10322435
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10322435 AND SRC:MED&resulttype=core&format=json
retrieved
7 December 2019
author name string
P Linder
series ordinal
3
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10322435
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10322435 AND SRC:MED&resulttype=core&format=json
retrieved
7 December 2019
language of work or name
English
0 references
publication date
1 May 1999
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10322435
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10322435 AND SRC:MED&resulttype=core&format=json
retrieved
7 December 2019
number of pages
7
1 reference
based on heuristic
inferred from page(s)
published in
Trends in Biochemical Sciences
2 references
stated in
PubMed
PubMed publication ID
10322435
retrieved
1 December 2016
stated in
Europe PubMed Central
PubMed publication ID
10322435
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10322435 AND SRC:MED&resulttype=core&format=json
retrieved
7 December 2019
volume
24
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10322435
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10322435 AND SRC:MED&resulttype=core&format=json
retrieved
7 December 2019
issue
5
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10322435
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10322435 AND SRC:MED&resulttype=core&format=json
retrieved
7 December 2019
page(s)
192-198
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10322435
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10322435 AND SRC:MED&resulttype=core&format=json
retrieved
7 December 2019
cites work
RNA chaperones and the RNA folding problem
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
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7 January 2021
based on heuristic
inferred from DOI database lookup
Mechanisms of helicase-catalyzed DNA unwinding
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
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7 January 2021
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Helicases: amino acid sequence comparisons and structure-function relationships
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
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7 January 2021
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U6atac snRNA, the highly divergent counterpart of U6 snRNA, is the specific target that mediates inhibition of AT-AC splicing by the influenza virus NS1 protein
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
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7 January 2021
based on heuristic
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Crystal structure of RNA helicase from genotype 1b hepatitis C virus. A feasible mechanism of unwinding duplex RNA
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Hepatitis C virus NS3 RNA helicase domain with a bound oligonucleotide: the crystal structure provides insights into the mode of unwinding
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Structure of the hepatitis C virus RNA helicase domain
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Helicases: a unifying structural theme?
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The QRxGRxGRxxxG motif of the vaccinia virus DExH box RNA helicase NPH-II is required for ATP hydrolysis and RNA unwinding but not for RNA binding
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The DEAD box protein eIF4A. 2. A cycle of nucleotide and RNA-dependent conformational changes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The DEAD box protein eIF4A. 1. A minimal kinetic and thermodynamic framework reveals coupled binding of RNA and nucleotide
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
D-E-A-D protein family of putative RNA helicases
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
SWI2/SNF2 and related proteins: ATP-driven motors that disrupt protein-DNA interactions?
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
RAD25 is a DNA helicase required for DNA repair and RNA polymerase II transcription
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Mechanical Devices of the Spliceosome: Motors, Clocks, Springs, and Things
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
An RNA switch at the 5' splice site requires ATP and the DEAD box protein Prp28p
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
RNA unwinding in U4/U6 snRNPs requires ATP hydrolysis and the DEIH-box splicing factor Brr2
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Prp43: An RNA helicase-like factor involved in spliceosome disassembly
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Processing of pre-ribosomal RNA in Saccharomyces cerevisiae
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Guiding ribose methylation of rRNA
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Birth of the snoRNPs: the evolution of the modification-guide snoRNAs.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The rRNA-processing function of the yeast U14 small nucleolar RNA can be rescued by a conserved RNA helicase-like protein
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Rok1p is a putative RNA helicase required for rRNA processing
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Fal1p is an essential DEAD-box protein involved in 40S-ribosomal-subunit biogenesis in Saccharomyces cerevisiae
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
18S rRNA processing requires the RNA helicase-like protein Rrp3.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Dbp3p, a putative RNA helicase in Saccharomyces cerevisiae, is required for efficient pre-rRNA processing predominantly at site A3.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Dob1p (Mtr4p) is a putative ATP-dependent RNA helicase required for the 3' end formation of 5.8S rRNA in Saccharomyces cerevisiae
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Dbp6p is an essential putative ATP-dependent RNA helicase required for 60S-ribosomal-subunit assembly in Saccharomyces cerevisiae
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Dbp7p, a putative ATP-dependent RNA helicase from Saccharomyces cerevisiae, is required for 60S ribosomal subunit assembly
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Spb4p, an essential putative RNA helicase, is required for a late step in the assembly of 60S ribosomal subunits in Saccharomyces cerevisiae.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The yeast SEN1 gene is required for the processing of diverse RNA classes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The putative nucleic acid helicase Sen1p is required for formation and stability of termini and for maximal rates of synthesis and levels of accumulation of small nucleolar RNAs in Saccharomyces cerevisiae
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Dbp5p/Rat8p is a yeast nuclear pore-associated DEAD-box protein essential for RNA export
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Dbp5p, a cytosolic RNA helicase, is required for poly(A) RNA export
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A DEAD-box-family protein is required for nucleocytoplasmic transport of yeast mRNA
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Bidirectional RNA helicase activity of eucaryotic translation initiation factors 4A and 4F
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The p20 and Ded1 proteins have antagonistic roles in eIF4E-dependent translation in Saccharomyces cerevisiae.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Requirement of the DEAD-Box protein ded1p for messenger RNA translation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A suppressor of yeastspp81/ded1mutations encodes a very similar putative ATP-dependent RNA helicase
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Degradation of mRNA in eukaryotes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Making sense of nonsense in yeast
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Upf1p, Nmd2p, and Upf3p are interacting components of the yeast nonsense-mediated mRNA decay pathway
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The surveillance complex interacts with the translation release factors to enhance termination and degrade aberrant mRNAs
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identification of a novel component of the nonsense-mediated mRNA decay pathway by use of an interacting protein screen
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Overexpression of DEAD box protein pMSS116 promotes ATP-dependent splicing of a yeast group II intronin vitro
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Mitochondrial splicing requires a protein from a novel helicase family
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016/S0968-0004(99)01376-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/S0968-0004(99)01376-6
2 references
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2085369
stated in
Europe PubMed Central
PubMed publication ID
10322435
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10322435 AND SRC:MED&resulttype=core&format=json
retrieved
7 December 2019
OpenCitations bibliographic resource ID
2085369
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2085369
PubMed publication ID
10322435
2 references
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2085369
stated in
Europe PubMed Central
PubMed publication ID
10322435
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10322435 AND SRC:MED&resulttype=core&format=json
retrieved
7 December 2019
ResearchGate publication ID
222950864
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