(Q24796729)

Rasmus Nielsen

1

0 references

Carlos D. Bustamante

2

Carlos Bustamante

0 references

Andrew G. Clark

Andrew G Clark

3

1 reference

ORCID Public Data File 2021

Michele Cargill

13

Michele Cargill

0 references

Adi Fledel-Alon

7

Adi Fledel-Alon

0 references

Stephen Glanowski

4

Stephen Glanowski

0 references

Daniel Civello

9

Daniel Civello

0 references

Melissa J Hubisz

6

Melissa J Hubisz

0 references

author name string

David M Tanenbaum

8

0 references

Thomas J White

10

0 references

John J Sninsky

11

0 references

Mark D Adams

Creative Commons Attribution 4.0 International

12

0 references

language of work or name

English

0 references

publication date

June 2005

0 references

published in

PLOS Biology

0 references

volume

3

0 references

issue

6

0 references

page(s)

e170

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copyright license

start time

3 May 2005

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Ancient adaptive evolution of the primate antiviral DNA-editing enzyme APOBEC3G

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Lineage-specific gene duplication and loss in human and great ape evolution

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

PANTHER: a browsable database of gene products organized by biological function, using curated protein family and subfamily classification

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Genomewide comparison of DNA sequences between humans and chimpanzees

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

An abundance of X-linked genes expressed in spermatogonia

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Characterization ofSCML1,a New Gene in Xp22, with Homology to Developmental Polycomb Genes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Long term trends in the evolution of H(3) HA1 human influenza type A

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

PAML: a program package for phylogenetic analysis by maximum likelihood

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Strong male-driven evolution of DNA sequences in humans and apes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Statistical methods for detecting molecular adaptation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

PANTHER: a library of protein families and subfamilies indexed by function

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Large-scale analysis of the human and mouse transcriptomes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Accelerated evolution of nervous system genes in the origin of Homo sapiens

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Intra- and interspecific variation in primate gene expression patterns

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Likelihood Models for Detecting Positively Selected Amino Acid Sites and Applications to the HIV-1 Envelope Gene

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

PolyPhred: automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Positive selection on the H3 hemagglutinin gene of human influenza virus A.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

A pseudohitchhiking model of X vs. autosomal diversity

9 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

DNA sequence and comparative analysis of chimpanzee chromosome 22.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Progress in the use of microarray technology to study the neurobiology of disease

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

The allele frequency spectrum in genome-wide human variation data reveals signals of differential demographic history in three large world populations

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

New explicit expressions for relative frequencies of single-nucleotide polymorphisms with application to statistical inference on population growth.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

The signature of positive selection at randomly chosen loci.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Directional selection and the site-frequency spectrum.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Statistical tests of selective neutrality in the age of genomics

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Evolutionary EST analysis identifies rapidly evolving male reproductive proteins in Drosophila

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Rapid evolution of male reproductive genes in the descent of man.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

An early and massive wave of germinal cell apoptosis is required for the development of functional spermatogenesis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Rapid evolution of immunoglobulin superfamily C2 domains expressed in immune system cells

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Allelic genealogy under overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Population genetics of polymorphism and divergence

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Large-scale search for genes on which positive selection may operate

28 September 2017

1 reference

Crossref

https://api.crossref.org/works/10.1371/JOURNAL.PBIO.0030170

A Neutral Explanation for the Correlation of Diversity with Recombination Rates in Humans

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Dichotomy of single-nucleotide polymorphism haplotypes in olfactory receptor genes and pseudogenes.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Involvement of apoptosis in the induction of germ cell degeneration in adult rats after gonadotropin-releasing hormone antagonist treatment.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088278

Fas expression correlates with human germ cell degeneration in meiotic and post-meiotic arrest of spermatogenesis

28 November 2018

1 reference

12 December 2020

Evolutionary biology. Protamine wars

1 reference

12 December 2020

Pervasive adaptive evolution in mammalian fertilization proteins

1 reference

12 December 2020

Sex-linked mammalian sperm proteins evolve faster than autosomal ones

1 reference

12 December 2020

Frequent false detection of positive selection by the likelihood method with branch-site models

1 reference

12 December 2020

Eukaryotic transcription factors: identification, characterization and functions

1 reference

12 December 2020

The Relative Rates of Evolution of Sex Chromosomes and Autosomes

1 reference

Crossref

https://api.crossref.org/works/10.1371/JOURNAL.PBIO.0030170

7 January 2021

inferred from DOI database lookup

An improved Bonferroni procedure for multiple tests of significance

1 reference

Crossref

https://api.crossref.org/works/10.1371/JOURNAL.PBIO.0030170

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1371/JOURNAL.PBIO.0030170

1 reference

1 reference

1 reference

PubMed publication ID

15869325

1 reference