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  1. miRPipe miRPipe Public

    miRPipe: Open source RNA-Seq bioinformatics analysis docker for identification of miRNAs and piRNAs

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  2. miRSim miRSim Public

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  3. qskeleton qskeleton Public

    Polyhedral computation software for solving facet and vertex enumeration problems for convex polyhedra and performing Fourier-Motzkin elimination

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  4. fishplot fishplot Public

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    Create timecourse "fish plots" that show changes in the clonal architecture of tumors

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  5. tellurium tellurium Public

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    Python Environment for Modeling and Simulating Biological Systems

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  6. BDL-SP-Bio-inspired-DL-architecture-for-Identification-of-altered-Signaling-Pathways-in-MM BDL-SP-Bio-inspired-DL-architecture-for-Identification-of-altered-Signaling-Pathways-in-MM Public

    Bio-inspired DL model for identification of significantly altered pathways

    Jupyter Notebook 1 2