Run multiple metagenome filtering programs using Docker containers
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Updated
Aug 4, 2023 - Shell
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quast
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The repository contains a comprehensive pipeline for genome assembly and quality assessment, designed for genomic data analysis. It integrates various bioinformatics tools for accurate genome assembly.
spades
fastp
quast
nextflow-pipeline
dynamic-command-construction-for-preprocessing
scalability-across-computational-environments
a-detailed-demonstration-of-naming-consistency
trimming-combinations
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Jun 15, 2024 - HTML
🦇🧫📊Supplementary materials for study on bat gut shotgun metagenomics
phylogenetics
beta-diversity
microbial-communities
blast
spades
differential-abundance-analyses
fastq-files
refseq
alpha-diversity
prokka
quast
kraken2
abricate
lab-journal
maaslin2
shotgun-metagenomics
fastani
humann3
virsorter2
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Nov 26, 2024 - HTML
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