Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.
pipeline
annotation
nextflow
reproducible-research
virulence-factor
genome-browser
genome-analysis
rgi
virulence-genes
mobile-genetic-elements
barrnap
prophages
antimicrobial-genes-annotation
methylation-annotation
ko-annotation
insertion-sequences
genomic-islands-prediction
prophage-sequences-prediction
phigaro
rrna-prediction
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Updated
Sep 20, 2024 - Nextflow