mehdiborji / nanoranger Star 15 Code Issues Pull requests simplified cellranger for long-read data linux bioinformatics python3 bioinformatics-pipeline pacbio computational-science 10x-genomics vdj-recombination tcr-repertoire single-cell-rna-seq minimap2 spatial-transcriptomics sc-rna-seq computational-genomics mixcr cellranger slide-seq tcr-seq nanoranger Updated Sep 18, 2024 Python
milaboratory / mixcr-rna-seq-paper Star 3 Code Issues Pull requests In silico data and tests analysis docker-image mixcr Updated Jul 17, 2018 Jupyter Notebook
pughlab / ped_CapTCRseq Star 1 Code Issues Pull requests Dynamics of peripheral T-cell repertoire in pediatric cancer patients over the course of chemoradiation ngs tcr-repertoire pediatric-cancer mixcr Updated May 23, 2024 Jupyter Notebook
sguizard / nf-mixcr Star 0 Code Issues Pull requests Discussions A nextflow pipeline for TCR repertoire building with MiXCR nextflow bioinformatics-pipeline t-cell-receptor nextflow-pipeline mixcr Updated Feb 19, 2024 Nextflow
BenNicolet / TCR_clonality_analysis Star 0 Code Issues Pull requests TCR clonotype analysis using mixcr and immunarch. immunology tcr-repertoire mixcr Updated Mar 16, 2021 Shell