Library for performing multiphase simulations (based on the Shan-Chen model) in complicated geometries (i.e. porous media 3D images)
-
Updated
Dec 1, 2023 - Python
Library for performing multiphase simulations (based on the Shan-Chen model) in complicated geometries (i.e. porous media 3D images)
OpenFOAM solver for performing single- and two-phase flow simulations on hybrid-scale porous media.
Deep-Learning for Tidemark Segmentation in Human Osteochondral Tissues Imaged with Micro-computed Tomography
Direct pore-scale simulation of single- and two-phase flow through confined media (alpha-release / experimental)
Reconstruction and image processing of micro-CT/nano-CT data taken at SPring-8 and APS Argonne.
ITK Image IO for Scanco MicroCT .ISQ files
Software for processing output of Scanco uCT machines/ any ISQ or TIF producing machine, and producing data. See instructions.pdf for full explaination.
ITK filters to reduce ring artifacts common in x-ray computed tomography.
GUI-based neuronal network model building
The notebook demonstrates the workflow for obtaining pore size distribution from binarized micro-CT images. The general principle involves identifying each pore, estimating the volume of each pore, and ultimately determining the radius of a sphere with an equivalent volume of each pore.
ImageJ/Fiji macro that crops any given image stack without having to load it into memory first.
Code used to analyze adaptive decoupling in insects.
Extract ROIs (e.g. nerves, blood vessels) from multi-terabyte cloud-hosted medical scans.
Converts any image stack to a Stratovan Checkpoint file (*.ckpt) keeping specimen names and voxel sizes.
Add a description, image, and links to the micro-ct topic page so that developers can more easily learn about it.
To associate your repository with the micro-ct topic, visit your repo's landing page and select "manage topics."