Signal-level algorithms for MinION data
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Updated
Aug 5, 2023 - C
Signal-level algorithms for MinION data
A tool to map bisulfite converted sequence reads and determine cytosine methylation states
R package for DNA methylation analysis
A (mostly) universal methylation extractor for BS-seq experiments.
Methylation/modified base calling separated from basecalling.
Deep neural networks for predicting CpG methylation
tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies
A bioinformatics tool for working with modified bases
Detecting methylation using signal-level features from Nanopore sequencing reads
Arioc: GPU-accelerated DNA short-read alignment
R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing
Detecting methylation using signal-level features from Nanopore sequencing reads of plants
MethPhaser: methylation-based haplotype phasing of human genomes
Python package to analyze DNA methylation data
Python-based preprocessing software for Illumina methylation arrays
DNA 5mC methylation detection from Dorado or Guppy basecalled Oxford Nanopore reads
Bioinformatics library in Kotlin
A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.
ENCODE whole-genome bisulfite sequencing (WGBS) pipeline
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