Registry of containerized biosimulation tools that support a standard command-line interface
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Updated
Jul 28, 2024 - Python
Registry of containerized biosimulation tools that support a standard command-line interface
AMICI biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Code associated with the Karr Lab's 2018 whole-cell modeling review in Current Opinion in Biotechnology
PySCeS biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
MASSpy mathematical simulation program via BioSimulators-compliant command-line interface and Docker container
CBMPy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
XPP mathematical simulation program via BioSimulators-compliant command-line interface and Docker container
BoolNet biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
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