R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox
R/Bioconductor Package - Interface to the Metabolomics Workbench RESTful API
QC systems for metabolomics studies
Collaborative workflow for untargeted metabolomics data processing and analysis using open-source tools. https://doi.org/10.3390/metabo13040463
R/Bioconductor package - STRUCT: STatistics in R Using Class Templates
Galaxy tools for msPurity package: includes precursor ion purity calculations and spectral matching
R package for Multi-isotope Labeling for Metabolomics Analysis
R/Bioconductor package - Peak Matrix Processing and signal batch correction for metabolomics data sets
Load and analyze MS-DIAL alignment files in R for analysis of mass spectrometry data.
Real-time/post-acquisition untargeted LC-MS pre-processing
R package for annotation of glycans in MS1 and MS2 data
R script and Shiny app to perform stratified randomisation
R/Bioconductor package - STRUCT report
Optimize XCMS analytical parameters by running IPO workflow (Peak picking Retention time correction and grouping optimization) on Metabolights studies within the PhenoMeNal EU project.
The Hitchhiker’s Guide to untargeted lipidomics analysis: Practical guidelines
ProbMetab For Galaxy
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