Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.
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Updated
Jun 18, 2024 - R
Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.
CanvasXpress: A JavaScript Library for Data Analytics with Full Audit Trail Capabilities.
Tools to work with variant call format files
Inference of ploidy and heterozygosity structure using whole genome sequencing data
Genomic Data Retrieval with R
Gene set variation analysis
Development repository for the Bioconductor package 'mixOmics '
A grammar of genomic data transformation
Visual self-service analytics platform for big omics data.
Genome wide orthology inference and dNdS estimation
The bridge between the NCBI Gene Expression Omnibus and Bioconductor
Provide R access to the NCI Genomic Data Commons portal.
A small project to add ggplot2 extensions
Rapid standardisation and quality control of GWAS or QTL summary statistics
Find causal cell-types underlying complex trait genetics
Detailed bioinformatics scripts and methods used in the NAM genome paper.
MSigDB gene sets for multiple organisms in a tidy data format
Bioconductor package for management of multi-assay data
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