Here we are going to discuss variant calling on human datasets using GATK Best practices pipeline

vSNP -- validate SNPs

A nextflow pipeline for polishing CLR assemblies

a better freebayes-parallel

vSNP -- validate SNPs

This directory contains material that I've used in different courses

Codes for exome sequencing class being taught by Tychele N. Turner, Ph.D.

A workflow for using SpeedSeq to align and call SVs from WGS data

Short read mapping and variant calling

🔬 Влияние меди на антибиотикорезистентность у синегнойной палочки

Multi-class classification of drug resistance in MTB clinical isolates

Nextflow resequencing pipeline with bwa-mem and freebayes

BSA-QTL Mapping in Drosophila Ananassae

Multi-class classification of drug resistance in MTB clinical isolates