A Go package for engineering organisms.

This bartender version could handle arbitrary length of barcode

A Go package for designing DNA.

Scripts for executing a filtering, clustering and identification pipeline for eDNA samples.

Arctic Community Similarity using DNA Barcoding Data

Barcode Generator

Extract ITS and Neighboring Regions from Eukaryotic DNA Sequences

Official GitHub repository for the R package "Species Identity and Evolution in R" (spider)

bistro: barcode distribution

Jupyter notebooks for BFG-PCA related simulation and analysis.

FISHprobe: DNA Probe Design Pipeline

Linking BOLD sequences to specimens in GBIF

DNA BARCODE Statistics : Number of GBIF BOLD entries 2014-11-27

Map plotting with Plotly using public BOLD API COI data

Artifact repository for the paper "Scalable Classification of Organisms into a Taxonomy Using Hierarchical Supervised Learners", Journal of Bioinformatics and Computational Biology, 18(05), 2050026. doi:10.1142/S0219720020500262

DNA barcoding analysis pipeline

Code and data used for analysis and estimation of invertebrate biodiversity on a temperate forested island (Hauturu) based on DNA barcodes and soil DNA metabarcoding data.

Repository containing a python script for barcode gap plotting, as well as an example input-file for the script.

Jupyter notebooks for BFG-PCA related simulation and analysis.

A MATLAB suite implementing computer vision pipeline to extract information from the noisy TIRF microscopy data (image stack)