Repository of Jupyter Notebooks created by the Bio2Byte group
Notebooks used by https://locusofctrl.github.io
Synthetic Biology jupyter notebooks that streamline and guide the genetic experimentation and the design process
The Plant-Image-Batch-ID is a Python-based Jupyter Notebook designed for automated plant identification from a directory of images that utilizes the PlantNet API.
An educational Jupyter notebook for learning Interaction Analysis
Notebook for Honours project: Oral Campylobacter spp. and periodontal disease
Jupyter notebook of alternative functions for nucleotide string analysis and plotting
A Jupyter notebook to identify collective cell signalling in raw microscopy images
Pereira, Humberto, Flávio Azevedo, Lucília Domingues, and Björn Johansson. 2022. “Expression of Yarrowia Lipolytica Acetyl-CoA Carboxylase in Saccharomyces Cerevisiae and Its Effect on in-Vivo Accumulation of Malonyl-CoA.” *Computational and Structural Biotechnology Journal* 20 (January 1): 779–787.
A toy example in a google colab notebook that models how a simple biological body plan could be stored in object-oriented morphogenetic code.
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