The Snakemake workflow management system is a tool to create reproducible and scalable data analyses. Workflows are described via a human readable, Python based language. They can be seamlessly scaled to server, cluster, grid and cloud environments, without the need to modify the workflow definition. Finally, Snakemake workflows can entail a description of required software, which will be automatically deployed to any execution environment.

Homepage: https://snakemake.readthedocs.io

Note: Snakemake has just (Oct 4 2019) moved from bitbucket.org/snakemake/snakemake to Github. Forks and stars are not yet insightful here!

Copyright (c) 2012-2019 Johannes Köster [email protected] (see LICENSE)