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When I launch Unicycler, I get a GFA graph that I visualize with Bandage.
The colors of the nodes are determined inside the GFA file (sample attached in the image)
If I open Bandage via the interface, it interprets the colours perfectly. But it's not the same if I launch it via
Using --colour custom option should make Bandage use the colours in the GFA file. This is currently only in the development branch, but I will make a new release with this fix shortly.
Hi,
When I launch Unicycler, I get a GFA graph that I visualize with Bandage.
The colors of the nodes are determined inside the GFA file (sample attached in the image)
If I open Bandage via the interface, it interprets the colours perfectly. But it's not the same if I launch it via
Bandage image my_graph.gfa imagen.png --toutline 1 --names --fontsize 8
Which command should I use on the shell to achieve Bandage could to interpret the color specified inside the GFA file?
Screenshoot of the inside of GFA file, which include the specification of the node colours:
Bandage GUI capable of interpreting the GFA colours:
Bandage command is NOT able to interpretate the GFA colours:
Bandage image my_graph.gfa imagen.png --toutline 1 --names --fontsize 8
Which command should I use on the shell to achieve Bandage could to interpret the color specified inside the GFA file?
Thanks a lot in advance!!!
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