to_parquet swallows NoCredentialsError #27679

languitar · 2019-07-31T15:43:21Z

Code Sample, a copy-pastable example if possible

try: 
   pd.DataFrame({'foo': [None, ['foo', 'bar']]}).to_parquet('s3://foo/bar') 
except Exception as e: 
   print('Here')

Problem description

Without credentials configured, the above code does not write any output, but also doesn't end up in the exception handling code. Instead, on stdout or stderr, an exception is printed:

Exception ignored in: <function AbstractBufferedFile.__del__ at 0x7fe0ae8db440>
Traceback (most recent call last):
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/fsspec/spec.py", line 1137, in __del__
    self.close()
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/fsspec/spec.py", line 1114, in close
    self.flush(force=True)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/fsspec/spec.py", line 986, in flush
    self._initiate_upload()
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/s3fs/core.py", line 951, in _initiate_upload
    Bucket=self.bucket, Key=self.key, ACL=self.acl)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/s3fs/core.py", line 939, in _call_s3
    **kwargs)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/s3fs/core.py", line 182, in _call_s3
    return method(**additional_kwargs)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/client.py", line 357, in _api_call
    return self._make_api_call(operation_name, kwargs)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/client.py", line 648, in _make_api_call
    operation_model, request_dict, request_context)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/client.py", line 667, in _make_request
    return self._endpoint.make_request(operation_model, request_dict)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/endpoint.py", line 102, in make_request
    return self._send_request(request_dict, operation_model)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/endpoint.py", line 132, in _send_request
    request = self.create_request(request_dict, operation_model)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/endpoint.py", line 116, in create_request
    operation_name=operation_model.name)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/hooks.py", line 356, in emit
    return self._emitter.emit(aliased_event_name, **kwargs)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/hooks.py", line 228, in emit
    return self._emit(event_name, kwargs)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/hooks.py", line 211, in _emit
    response = handler(**kwargs)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/signers.py", line 90, in handler
    return self.sign(operation_name, request)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/signers.py", line 157, in sign
    auth.add_auth(request)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/auth.py", line 425, in add_auth
    super(S3SigV4Auth, self).add_auth(request)
  File "/home/languitar/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/auth.py", line 357, in add_auth
    raise NoCredentialsError
botocore.exceptions.NoCredentialsError: Unable to locate credentials

Expected Output

Here

Output of `pd.show_versions()`

[paste the output of `pd.show_versions()` here below this line]
INSTALLED VERSIONS

commit : None
python : 3.7.4.final.0
python-bits : 64
OS : Linux
OS-release : 4.19.61-1-lts
machine : x86_64
processor :
byteorder : little
LC_ALL : None
LANG : en_US.UTF-8
LOCALE : en_US.UTF-8

pandas : 0.25.0
numpy : 1.17.0
pytz : 2019.1
dateutil : 2.8.0
pip : 19.2.1
setuptools : 41.0.1
Cython : None
pytest : None
hypothesis : None
sphinx : None
blosc : None
feather : None
xlsxwriter : 1.1.8
lxml.etree : None
html5lib : None
pymysql : None
psycopg2 : None
jinja2 : 2.10.1
IPython : 7.7.0
pandas_datareader: None
bs4 : None
bottleneck : None
fastparquet : None
gcsfs : None
lxml.etree : None
matplotlib : None
numexpr : None
odfpy : None
openpyxl : None
pandas_gbq : None
pyarrow : 0.14.1
pytables : None
s3fs : 0.3.1
scipy : None
sqlalchemy : None
tables : None
xarray : None
xlrd : None
xlwt : None
xlsxwriter : 1.1.8

The text was updated successfully, but these errors were encountered:

TomAugspurger · 2019-07-31T15:55:10Z

Based on Exception ignored in: <function AbstractBufferedFile.__del__ at 0x7fe0ae8db440>

this is most likely an issue in s3fs / fsspec, right? Or do you think it's in how pandas is calling things?

languitar · 2019-08-01T07:06:18Z

I have no idea who is responsible for this.

TomAugspurger · 2019-08-01T11:17:04Z

Thanks. Let us know if you're interested in looking further.

…

On Thu, Aug 1, 2019 at 2:06 AM Johannes Wienke ***@***.***> wrote: I have no idea who is responsible for this. — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#27679?email_source=notifications&email_token=AAKAOIRAAJJ6EK3VTOGO35LQCKDPDA5CNFSM4IIIB6NKYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOD3JRN3Y#issuecomment-517150447>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AAKAOIQ4GRZPIV7BVBUMA7DQCKDPDANCNFSM4IIIB6NA> .

languitar · 2019-08-01T13:18:28Z

Using S3FileSystem directly with anon=False and no credentials correctly raises the exception. So it must be something around in pandas that is swallowing this:

In [4]: s3fs.S3FileSystem(anon=False).open('/test/bar')                                                                                                                                                             
---------------------------------------------------------------------------
NoCredentialsError                        Traceback (most recent call last)
<ipython-input-4-04d546643798> in <module>
----> 1 s3fs.S3FileSystem(anon=False).open('/test/bar')

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/fsspec/spec.py in open(self, path, mode, block_size, **kwargs)
    658             ac = kwargs.pop('autocommit', not self._intrans)
    659             f = self._open(path, mode=mode, block_size=block_size,
--> 660                            autocommit=ac, **kwargs)
    661             if not ac:
    662                 self.transaction.files.append(f)

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/s3fs/core.py in _open(self, path, mode, block_size, acl, version_id, fill_cache, cache_type, autocommit, **kwargs)
    301                       version_id=version_id, fill_cache=fill_cache,
    302                       s3_additional_kwargs=kw, cache_type=cache_type,
--> 303                       autocommit=autocommit)
    304 
    305     def _lsdir(self, path, refresh=False, max_items=None):

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/s3fs/core.py in __init__(self, s3, path, mode, block_size, acl, version_id, fill_cache, s3_additional_kwargs, autocommit, cache_type)
    913         self.s3_additional_kwargs = s3_additional_kwargs or {}
    914         super().__init__(s3, path, mode, block_size, autocommit=autocommit,
--> 915                          cache_type=cache_type)
    916         if self.writable():
    917             if block_size < 5 * 2 ** 20:

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/fsspec/spec.py in __init__(self, fs, path, mode, block_size, autocommit, cache_type, **kwargs)
    853         if mode == 'rb':
    854             if not hasattr(self, 'details'):
--> 855                 self.details = fs.info(path)
    856             self.size = self.details['size']
    857             self.cache = caches[cache_type](self.blocksize, self._fetch_range,

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/s3fs/core.py in info(self, path, version_id)
    472             except ParamValidationError as e:
    473                 raise ValueError('Failed to head path %r: %s' % (path, e))
--> 474         return super().info(path)
    475 
    476     def ls(self, path, detail=False, refresh=False, **kwargs):

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/fsspec/spec.py in info(self, path, **kwargs)
    466         """
    467         path = self._strip_protocol(path)
--> 468         out = self.ls(self._parent(path), detail=True, **kwargs)
    469         out = [o for o in out if o['name'].rstrip('/') == path]
    470         if out:

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/s3fs/core.py in ls(self, path, detail, refresh, **kwargs)
    490         """
    491         path = self._strip_protocol(path).rstrip('/')
--> 492         files = self._ls(path, refresh=refresh)
    493         if not files:
    494             files = self._ls(self._parent(path), refresh=refresh)

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/s3fs/core.py in _ls(self, path, refresh)
    428             return self._lsbuckets(refresh)
    429         else:
--> 430             return self._lsdir(path, refresh)
    431 
    432     def exists(self, path):

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/s3fs/core.py in _lsdir(self, path, refresh, max_items)
    319                 files = []
    320                 dircache = []
--> 321                 for i in it:
    322                     dircache.extend(i.get('CommonPrefixes', []))
    323                     for c in i.get('Contents', []):

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/paginate.py in __iter__(self)
    253         self._inject_starting_params(current_kwargs)
    254         while True:
--> 255             response = self._make_request(current_kwargs)
    256             parsed = self._extract_parsed_response(response)
    257             if first_request:

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/paginate.py in _make_request(self, current_kwargs)
    330 
    331     def _make_request(self, current_kwargs):
--> 332         return self._method(**current_kwargs)
    333 
    334     def _extract_parsed_response(self, response):

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/client.py in _api_call(self, *args, **kwargs)
    355                     "%s() only accepts keyword arguments." % py_operation_name)
    356             # The "self" in this scope is referring to the BaseClient.
--> 357             return self._make_api_call(operation_name, kwargs)
    358 
    359         _api_call.__name__ = str(py_operation_name)

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/client.py in _make_api_call(self, operation_name, api_params)
    646         else:
    647             http, parsed_response = self._make_request(
--> 648                 operation_model, request_dict, request_context)
    649 
    650         self.meta.events.emit(

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/client.py in _make_request(self, operation_model, request_dict, request_context)
    665     def _make_request(self, operation_model, request_dict, request_context):
    666         try:
--> 667             return self._endpoint.make_request(operation_model, request_dict)
    668         except Exception as e:
    669             self.meta.events.emit(

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/endpoint.py in make_request(self, operation_model, request_dict)
    100         logger.debug("Making request for %s with params: %s",
    101                      operation_model, request_dict)
--> 102         return self._send_request(request_dict, operation_model)
    103 
    104     def create_request(self, params, operation_model=None):

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/endpoint.py in _send_request(self, request_dict, operation_model)
    130     def _send_request(self, request_dict, operation_model):
    131         attempts = 1
--> 132         request = self.create_request(request_dict, operation_model)
    133         context = request_dict['context']
    134         success_response, exception = self._get_response(

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/endpoint.py in create_request(self, params, operation_model)
    114                 op_name=operation_model.name)
    115             self._event_emitter.emit(event_name, request=request,
--> 116                                      operation_name=operation_model.name)
    117         prepared_request = self.prepare_request(request)
    118         return prepared_request

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/hooks.py in emit(self, event_name, **kwargs)
    354     def emit(self, event_name, **kwargs):
    355         aliased_event_name = self._alias_event_name(event_name)
--> 356         return self._emitter.emit(aliased_event_name, **kwargs)
    357 
    358     def emit_until_response(self, event_name, **kwargs):

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/hooks.py in emit(self, event_name, **kwargs)
    226                  handlers.
    227         """
--> 228         return self._emit(event_name, kwargs)
    229 
    230     def emit_until_response(self, event_name, **kwargs):

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/hooks.py in _emit(self, event_name, kwargs, stop_on_response)
    209         for handler in handlers_to_call:
    210             logger.debug('Event %s: calling handler %s', event_name, handler)
--> 211             response = handler(**kwargs)
    212             responses.append((handler, response))
    213             if stop_on_response and response is not None:

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/signers.py in handler(self, operation_name, request, **kwargs)
     88         # this method is invoked to sign the request.
     89         # Don't call this method directly.
---> 90         return self.sign(operation_name, request)
     91 
     92     def sign(self, operation_name, request, region_name=None,

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/signers.py in sign(self, operation_name, request, region_name, signing_type, expires_in, signing_name)
    155                     raise e
    156 
--> 157             auth.add_auth(request)
    158 
    159     def _choose_signer(self, operation_name, signing_type, context):

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/auth.py in add_auth(self, request)
    423         self._region_name = signing_context.get(
    424             'region', self._default_region_name)
--> 425         super(S3SigV4Auth, self).add_auth(request)
    426 
    427     def _modify_request_before_signing(self, request):

~/.pyenv/versions/analytics-3.7/lib/python3.7/site-packages/botocore/auth.py in add_auth(self, request)
    355     def add_auth(self, request):
    356         if self.credentials is None:
--> 357             raise NoCredentialsError
    358         datetime_now = datetime.datetime.utcnow()
    359         request.context['timestamp'] = datetime_now.strftime(SIGV4_TIMESTAMP)

NoCredentialsError: Unable to locate credentials

TomAugspurger · 2019-08-01T13:23:43Z

Pandas does do a try / except in io.s3.get_filepath_or_buffer. So if you don't have creds, we fall back to doing an anon=True request.

languitar · 2019-08-01T20:28:55Z

But that doesn't work for the write in my case. So nothing is written and no exception is raised.

alimcmaster1 · 2020-04-18T23:40:46Z

Likely related to #32486 #32470

TomAugspurger added the Needs Info Clarification about behavior needed to assess issue label Aug 1, 2019

jbrockmendel added the IO Parquet parquet, feather label Aug 3, 2019

simonjayhawkins added Error Reporting Incorrect or improved errors from pandas and removed Needs Info Clarification about behavior needed to assess issue labels Apr 1, 2020

simonjayhawkins added this to the Contributions Welcome milestone Apr 1, 2020

alimcmaster1 mentioned this issue Apr 19, 2020

IO: Fix S3 Error Handling #33645

Merged

4 tasks

mroeschke added the Bug label Apr 19, 2020

jreback modified the milestones: Contributions Welcome, 1.1 Apr 20, 2020

jreback closed this as completed in #33645 Apr 21, 2020

simonjayhawkins modified the milestones: 1.1, 1.0.4 May 26, 2020

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to_parquet swallows NoCredentialsError #27679

to_parquet swallows NoCredentialsError #27679

languitar commented Jul 31, 2019

[paste the output of `pd.show_versions()` here below this line]
INSTALLED VERSIONS

TomAugspurger commented Jul 31, 2019

languitar commented Aug 1, 2019

TomAugspurger commented Aug 1, 2019 via email

languitar commented Aug 1, 2019

TomAugspurger commented Aug 1, 2019 via email

languitar commented Aug 1, 2019

alimcmaster1 commented Apr 18, 2020

to_parquet swallows NoCredentialsError #27679

to_parquet swallows NoCredentialsError #27679

Comments

languitar commented Jul 31, 2019

Code Sample, a copy-pastable example if possible

Problem description

Expected Output

Output of pd.show_versions()

[paste the output of pd.show_versions() here below this line] INSTALLED VERSIONS

TomAugspurger commented Jul 31, 2019

languitar commented Aug 1, 2019

TomAugspurger commented Aug 1, 2019 via email

languitar commented Aug 1, 2019

TomAugspurger commented Aug 1, 2019 via email

languitar commented Aug 1, 2019

alimcmaster1 commented Apr 18, 2020

Output of `pd.show_versions()`

[paste the output of `pd.show_versions()` here below this line]
INSTALLED VERSIONS