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Achievements

Achievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: Starstruckx2Achievement: Pull Sharkx2

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  • sort_r Public

    Portable qsort_r / qsort_s

    C 48 8 Updated Aug 31, 2023

  • BitArray Public

    C bit array structs and methods

    C 202 44 Creative Commons Zero v1.0 Universal Updated Mar 25, 2022

  • seq-align Public

    Fast, portable C implementations of Needleman-Wunsch and Smith-Waterman sequence alignment

    C 94 39 Updated Mar 18, 2021

  • htslib-test Public

    C Updated Aug 28, 2017

  • carrays Public

    Algorithms that work on generic C arrays

    C 10 Creative Commons Zero v1.0 Universal Updated Feb 13, 2017

  • dotfiles Public

    Useful bash scripts for your .profile file

    Shell Updated Feb 12, 2017

  • pyRBT Public

    Red Black Tree in Python

    Python 1 MIT License Updated Dec 5, 2016

  • seq_file Public

    Library for Reading Bioinformatic Sequence Data in C

    C 14 3 Updated Nov 7, 2016

  • string_buffer Public

    libstrbuf: A powerful string library for C

    C 17 6 Creative Commons Zero v1.0 Universal Updated Oct 15, 2016

  • cpp_priority_heap Public

    Simple priority heap with updatable priorities in c 11

    C 1 Updated Jul 6, 2016

  • thumper Public

    A small tool to check file systems

    C 1 Updated Jun 5, 2016

  • htslib Public

    Forked from samtools/htslib

    C library for high-throughput sequencing data formats

    C Other Updated Mar 20, 2016

  • tensorflow Public

    Forked from tensorflow/tensorflow

    Computation using data flow graphs for scalable machine learning

    C Apache License 2.0 Updated Feb 15, 2016

  • biogrok Public

    Bash scripts for everyday bioinformatics

    bioinformatics dna
    Shell 2 Updated Jan 13, 2016

  • vcf-slim Public

    Light weight VCF annotation and filtering

    C 1 1 Updated Jan 5, 2016

  • bioinf-perl Public

    Perl libraries and scripts for everyday bioinformatics tasks, including VCF, FASTA & FASTQ handling

    Perl 1 Updated Dec 15, 2015

  • readsim Public

    Simulate DNA sequencing reads using real reads

    C 2 2 Updated Nov 1, 2015

  • madcrowlib Public

    Common C data structure macros

    C 5 MIT License Updated Oct 27, 2015

  • cortex_binary_reader Public

    Read cortex graph files (historic page, use McCortex view instead)

    C 1 1 Updated Aug 12, 2015

  • GFA-spec Public

    Forked from GFA-spec/GFA-spec

    Graphical Fragment Assembly (GFA) Format Specification

    Makefile Updated Aug 10, 2015

  • jelly-hash Public

    Low memory multithreaded hash table

    C 24 1 Updated Mar 23, 2015

  • vcf-hack Public

    Hack-y C programs for modifying VCF files

    C 1 1 Updated Feb 26, 2015

  • msg-pool Public

    Multiple Producers / Multiple Consumers Message Passing Pool

    C 19 1 Updated Feb 20, 2015

  • strtools Public

    Small command line tools for manipulating strings

    C 1 Other Updated Dec 20, 2013

  • UtilityLibrary Public

    C Code for Good Housekeeping

    C 3 Updated May 9, 2013

  • GenomeDensity Public

    Density of events around objects on a genome

    Perl 1 Other Updated Sep 19, 2012

  • CortexLib Public

    Library code for handling data from the cortex variant caller

    C 2 Updated Jul 7, 2012