Skip to content
View nmagee's full-sized avatar

Highlights

  • Pro

Organizations

@databio @uvasomrc @uvarc @UVADS @uvasds-systems

Block or report nmagee

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
nmagee/README.md

Hi there 👋

I teach systems at the University of Virginia's School of Data Science. This means tools, platforms and infrastructure — containers, cloud, Kubernetes, HPC, GPUs — as well as a variety of databases and managed services. My work centers on designing and building systems in support of computational research, focusing heavily on containers, CI/CD, and automation/orchestration for bioinformatic, genomic, and other research workflows.

Here are some courses I have taught or am designing:

  • DS1002 Programming for Data Science (DS minor)
  • DS2002 Data Science Systems (DS minor)
  • DS2022 Systems I - Introduction to Computing (new, BSDS major)
  • DS3022 Systems II - Data Engineering (new, BSDS major)
  • DS4523 Advanced Topics in Systems (new, BSDS major)
  • CS4740 Cloud Computing (CS major)

Things that interest me lately:

More information:

Pinned Loading

  1. UVADS/git-basics UVADS/git-basics Public

    Set up, configure, and work with source control tools.

    SCSS 1

  2. UVADS/DS2022 UVADS/DS2022 Public

    Course material for DS2022 Systems I: Introduction to Computing

    2 1

  3. aws-snippets aws-snippets Public

    Sample CloudFormation templates for class.

    Python 1

  4. boto3-examples boto3-examples Public

    Python 2

  5. databio/LOLAweb databio/LOLAweb Public

    An interactive Shiny web application for genomic interval enrichment analysis using LOLA.

    R 16 2