This Open Catalog is a collaborative effort to consolidate expert knowledge on best practices for modernizing and optimizing code written in C, C , and Fortran programming languages.

Classic hello world script in Nextflow language

A DSL for data-driven computational pipelines

A proof of concept of RNAseq pipeline

On-demand containers provisioning service

Library for Java & Groovy modules shared across Seqera projects

Command line tool for Wave containers provisioning service

A flexible package manager that supports multiple versions, configurations, platforms, and compilers.

Seqera Platform installer scripts

Homebrew Tap of Seqera products and tools

Nextflow pipeline to stress Wave service

The GPars concurrency and parallelism framework for the JVM

Rapid builds of small Conda-based containers using micromamba.

SingularityCE is the Community Edition of Singularity, an open source container platform designed to be simple, fast, and secure.

Repository of Docker images created by Anaconda

Codes used for benchmarking open-source quantum simulation packages.

Conda recipes for the Eel project

Local filesystem registry for Singularity containers (intended for HPC) using LMOD. Works for users and admins.

Testing a remote registry for Singularity Registry HPC

Config files used to define parameters specific to compute environments at different Institutions

Repository to host tool-specific module files for the Nextflow DSL2 community!

Nextflow Tower CLI tool

Python implementation for automated pipeline launching through Tower CLI (beta)