Anaylze TOF spectra averaged by TOF-Tracer (https://github.com/lukasfischer83/TOF-Tracer2) to generate masslists.

Needs Qt5, eigen3, libhdf5 and qtcustomplot. For static compilation (no dlls, running on every system) you need a statically compiled Qt5.

Download and install Qt5, mesa libs and libhdf5 ( sudo apt install qtcreator libhdf5-serial-dev mesa-common-dev libgl1-mesa-dev) Unpack libs.zip to parent folder of source like this:

peakFit
   main.cpp
   ...
libs
   qcustomplot
   eigen-eigen232....

start QT creator, load project file and run qmake and build all

Download and install Qt5 with MinGW as compiler Download eigen3 and extract next to peakFit directory

(Tested with CMake-hdf5-1.8.16, confirmed not working on >1.10?) WARNING: Don't use any blank spaces in directory names, otherwhise compilation will fail (HDF5)! Download CMake HDF5 source and extract (https://www.hdfgroup.org/downloads/hdf5/source-code/ --> Building HDF5 with CMake) Get CMake and install with default options (Add to PATH) Add C:\Qt\Tools\mingwXXX_32\bin to PATH (Windows System Properties --> Advanced --> Environment Variables --> System Variables --> Path) REBOOT to have mingw in Path

• Start CMakeGui
• Choose "Browse Source..." and point to HDF5 source folder
• Choose "Browse Build..." and select a target for the binaries (Warning: does not create a subfolder, so create one!)
• specify Generator: MinGW Makefiles
• select "Specify native compilers"
• browse to compilers in C:/Qt/Tools/mingwXXX_32/bin/ (for default Qt installation) ( C:gcc, C :g , Fortran:gfortran)
• Uncheck unnecessary configure flags: HDF5_BUILD_EXAMPLES, HDF5_BUILD_TOOLS
• Re-run Configure
• Run Generate

• in a shell go to target path choosen in CMakeGui
• run mingw32-make.exe
• Grab a coffee

The libs should now be in the target\bin folder.

• Open Project
• Adjust include Paths for eigen3 and HDF5 Lib in manualPeakFitter.pro
• Run Qmake
• Compile

TODO