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A repository regarding my BME MSc thesis on pharmacogenomics drug response ranker models

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Rank Rx

Steps to recreate exepriment.

  1. Setup environment
    conda create -n rankenv python=3.10
  2. Activate environment
    conda activate rankevn
  3. Check the Anaconda Navigator > Environments, to see if the created env is activated and if not, manually select it.
  4. Install Tensorflow Ranking
    pip install -q tensorflow-ranking
  5. Check Tensorflow Ranking version, it should be Version: 0.5.5
    pip show tensorflow-ranking
  6. Check Tensorflow version, it should be Version: 2.15.1
    pip show tensorflow
  7. Check if Jupyter Notebook is installed on the created environment
  8. Launch Jupyter Notebook
    jupyter notebook
  9. Install additional modules: pandas

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A repository regarding my BME MSc thesis on pharmacogenomics drug response ranker models

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